Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02985 ATGGAGGAGCCACGTAAAGGGGAGAAAGAGAAGGAGAAGGGAGGGGAAGAAGGTAGGTACCGTGGTGTGAGAAGGAGGCCATGGGGTAAGTTTGGAGCAGAGATCAGAGACGCAACGAAACCTACGGGAAGACAATGGTTGGGGACATTTGACACGGCAGAAGAAGCAGCAAGAGCTTATGATCGTGCAGCCATTGGATTAAGGGGTGCCCTTGCAATCCTTAATTTCCCTGATGAGTACCATTCTCATCTCCCTTTCTTGTCATCATCGTCTTCTTCCTCTTCTTCTGCTAGTGTTATTGGAAGTTCTTCTACTGCACAAGGGGAAGTTATTGAGTTTGAGTATTTGGATGACAAGGTGTTGGAAGATCTTCTTGAGTTAGAGGAGAAGAGAGAGAAGAAGTGA 405 0.4691 MEEPRKGEKEKEKGGEEGRYRGVRRRPWGKFGAEIRDATKPTGRQWLGTFDTAEEAARAYDRAAIGLRGALAILNFPDEYHSHLPFLSSSSSSSSSASVIGSSSTAQGEVIEFEYLDDKVLEDLLELEEKREKK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02985 134 SUPERFAMILY DNA-binding domain 19 79 IPR016177 GO:0003677
Spst9g02985 134 SMART rav1_2 19 82 IPR001471 GO:0003700|GO:0006355
Spst9g02985 134 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Spst9g02985 134 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Spst9g02985 134 FunFam Ethylene-responsive transcription factor 2 19 79 - -
Spst9g02985 134 Pfam AP2 domain 19 69 IPR001471 GO:0003700|GO:0006355
Spst9g02985 134 Gene3D AP2/ERF domain 18 78 IPR036955 GO:0003700|GO:0006355
Spst9g02985 134 PANTHER DNA-BINDING DOMAIN 9 128 IPR044808 GO:0003700|GO:0009873
Spst9g02985 134 MobiDBLite consensus disorder prediction 1 23 - -
Spst9g02985 134 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
Spst9g02985 134 CDD AP2 19 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02985 Spst-Chr9 63993039 63993443 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02985 16 131 AP2-EREBP Transcription Factor Family AT3G23230 61.789 5.40e-43 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Spst9g02985 AP2 9.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02985 - - gmx:100807295 148.288