Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02974 ATGAAGTATATTCCGAGCAACAGCTTGAAGAGGCTTTTCTCGTTTGGGAAACGCGGGTTTGGGGAAGAAAACGATGTGAGGTTGGTGGCTCCTTCATGTGAAGAGCACCCTCCAAGACCCTCTTGGAAATGCTTCTCCTATGAAGAGTTGTTTGATGCCACCAATGGTTTTAGCTCAGAGAATTTGGTTGGGAGAGGAGGGTATGCAGAGGTTTATAAGGGAACGTTGCGTTGTGGTGAGGAAGTTGCAGTGAAGAGGCTCACGAAAACTTCAACTGATGAGAGGAAGGAGAAGGAGTTTCTCATAGAGATTGGCACCATTGGTCACGTGCGCCATGCCAACGTGTTGCCTCTTCTGGGGTGTTGTATTGACAATGGACTTTACCTCGTTTTTGAGCTATCCACCGTTGGTTCTGTTGCTTCTCTTATTCATGATGAGAACTTACCTCCTTTGGATTGGAAAACAAGGTATAAGATAGCTCTTGGAACTGCACATGGCCTTCACTACTTGCACAAAGGCTGCAAGAGAAGGATAATTCATAGGGACATCAAGGCCTCAAACATTTTGTTAACAGCAGATTTTGAACCAAAGATATCTGATTTTGGACTAGCAAGGTGGCTTCCATCTCAGTGGACTCACCACTCAATAGCCCCAATAGAAGGCACATTTGGGCATTTGGCGCCAGAGTACTACTTGCATGGAGTTGTGGATGAGAAGACAGATGTATTTGCCTTTGGTGTGTTCTTGCTTGAAATCCTTTCTGGGAGGAAACCAGTGGATGGATCTCACCAAAGCGTGCACAGCTGGGCTAAACCAATACTAAACAAAGGGGAGATAGAAAAGGTGGTAGATCCAAGGCTTGGAGGGGCTTATGACGTGACTCAGTTTAGTAGGGTAGCCTTTGCTGCCTCCCTGTGCATCCGGGCATCTGCAACTTGCAGACCTACCATGAGTGAGGTAATGGAAGTAATGGAGGAGTGGGAGATGGATAAAGAGAAGTGGGAAATGGCAGAGGAAGAAGAGCCAGAGGAGGAGTTATGGGATTTTGAGGATCTGGAATTTGCTTATGACAGTTCCTTTTCAATGTCAATACCTGACTCCATTAGAAGTACTTAG 1116 0.4597 MKYIPSNSLKRLFSFGKRGFGEENDVRLVAPSCEEHPPRPSWKCFSYEELFDATNGFSSENLVGRGGYAEVYKGTLRCGEEVAVKRLTKTSTDERKEKEFLIEIGTIGHVRHANVLPLLGCCIDNGLYLVFELSTVGSVASLIHDENLPPLDWKTRYKIALGTAHGLHYLHKGCKRRIIHRDIKASNILLTADFEPKISDFGLARWLPSQWTHHSIAPIEGTFGHLAPEYYLHGVVDEKTDVFAFGVFLLEILSGRKPVDGSHQSVHSWAKPILNKGEIEKVVDPRLGGAYDVTQFSRVAFAASLCIRASATCRPTMSEVMEVMEEWEMDKEKWEMAEEEEPEEELWDFEDLEFAYDSSFSMSIPDSIRST 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02974 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Spst9g02974 371 Gene3D Phosphorylase Kinase; domain 1 31 133 - -
Spst9g02974 371 ProSiteProfiles Protein kinase domain profile. 57 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02974 371 FunFam Putative receptor-like serine/threonine-protein kinase 26 133 - -
Spst9g02974 371 Pfam Protein tyrosine and serine/threonine kinase 60 265 IPR001245 GO:0004672|GO:0006468
Spst9g02974 371 FunFam Putative receptor-like serine/threonine-protein kinase 135 348 - -
Spst9g02974 371 SUPERFAMILY Protein kinase-like (PK-like) 42 342 IPR011009 -
Spst9g02974 371 Gene3D Transferase(Phosphotransferase) domain 1 135 351 - -
Spst9g02974 371 PANTHER OS08G0249100 PROTEIN 35 353 IPR046958 -
Spst9g02974 371 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Spst9g02974 371 SMART serkin_6 57 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02974 Spst-Chr9 63828038 63830884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02974 34 345 Receptor kinase-like Gene Family AT1G60800 41.796 1.71e-69 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Spst9g02974 PK_Tyr_Ser-Thr 4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02974 - - gmx:100804983 648.662