Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02973 ATGGTTGACAATATGAAGAGAAGCAGCTTCGAAGTGTTGGGAATGTGCTGTGCTACAGAAGCAGCACTGGTTGAAAGAATTCTGAAGCCTCTTCATGGAGTCAAACATGTCTCAGTGATAGTCCCTACACGAACAGTCACTGTGGTCCATGATGTTCTCTTCATTTCTGTGTTACAAATAGCTTCCTTTATTGCTTCGATTTATGAGAACTCATCATGTCAAACCCTTGTTGAGGTTCTAGCATCTGATGCACTGAATGCTGCAAGGCTTGAAGCTAGTTTGAAAGTACAGGGAGAGACTGATAATGAAAAGAAATGGCCAGATTTACCTACAATGGTGTGTGGCTTGTTTCTGGCACTTTCTTTCTTGAAATATGTATATCACCCTTTGGAATGGTTGGCACTTGGTTCTGTTTTCATTGGCTTCCCTAAGGTTCTCCTCAGGGCCATTGCATCCATTAGGGCTCTGACTCTTAATATCAACATTCTGGTTCTATTGGCAGTGTGTAGTACTGCTGCTTTACAAGATTTCTGGGAGGCTGGTGTCATCATCTTCCTGTTCTCCATTGCTCAATGGCTTGAGACACGAGCAACTCACAAGGTGACTACAGCTGGATTATTGTTTGTCTATACTCCACTCTTATCATGTGATAGTGAAGAATTTGTGTTTTCTTCTCTCTGGGACACATTAATCACTGTTAAGTTGTTCAATACACACCTAATACTTCAAGAAAACATTTCTTTTGAATATGTTATGGCAAAGGTGGCAATGTCCTCTTTGACAAGCATGGCTCCTCAAAAAGCTGTTATTGCTGAATCTGGGGAACGTGTTGACGTCAATGATGTTAAGATTAACACCATACTTGCAGTCAAGGCGGGTGACGCTATTCCTCTTGATGGAATCGTGGTGGAAGGAAAGTGTGAAGTTGATGAAAAGATGTTAACAGGAGAATCATTACCTGTGATCAAAGAGTTGGATTCAATAGTGTGGGCTGGAACTATTAATGTCAATGGATATATAAGTATAAAAACTACGGTGCTGGCAAAAGACACAGTGGTGGCTAGAATGTCAAAACTTGTTGAAGAGGCCTCTAGCAGAAAATCTCGAACACAAAGATTCATAGATAATTTTGCGAAGTACTATATTCCTTCTGTTGTTTTGATTTCAGCAAGCATTGCTGTGGTTCCAGCTGCATTAGAAGTGCCTGATATTAAGCCTTGGTTTCATCTTGCAATTGTGGTTTTGTTAAGTGCATGCCCTTGTGCTCTCATCCTATCCACTCCGGTTGCAATCTTTTGTGCACTCACAAAAGCTGCAATAAGTGGGTTATTACTGAAAGGTGGAGATTATATTGAAACACTTTCTGGAATTAAGACAGTCGCTTTTGATAAAACAGGCACAATAACGAGAGGAGAGTTCACCGTGACAGATTTTTCTGTTGTAGATGACATTAGCATTGAAACTTTACTGTACTGGGTTTCAAGTATTGAGAGCAAATCAAGTCATCCTATGGCAGCTGCTCTGGTGGAATATGGAATGTCGCGTTCTGTCAGGCCAATCCCTGAAAATGTGGAGAATTTCGATAATTTTGCAGGGGAAGGAGTTTTCGGTAGAATTGATGGGAAGGATATCTATATTGGCAATAGGAGAATTGGTGCTAGAGCTGATTCCAAAAGAGTTGATTGTCATCTGCAATTTCAAAGCCATGAAATTTCTAGCCCGAAACAATACTGTGGACCAACTCTGGTTGGAGTATTCAGCTTAGTTGATACTTGCAGATCAGGTGCTTTGGAGGCAATAGAACAGCTGAAGTTGTTAGGCGTGAGATCTGTCTTGCTAACAGGAGATAGCACTCAAGCTGCTATGTATGTTCACAGTCAGTTGAACCATCTACTAGACATTGTACACGCAGAGCTTCTACCTGTGGAAAAGGCTGTGATCATTGAGAATTGGAAGAAAGATGGGCTAACAGCCATGATTGGAGATGGCATAAATGATGCTCCTGCATTAGCCACTGCTGACATTGGTATCTCAATGGGAATATCTGGTTCTGCTCTTGCAAATGAGACAGGCAATGCAATTCTCATGTCGAATGACATCCAAAAAATACCGGAAGCCATTCGGCTAGCAAGGAAAACAACTAGAAAGCTCATTGAGAATGTCATTATTTCAATTGGCTTCAAGAGTGCTGTACTTGCATTGGCAATTTCAGGATACCCTATTGTTTGGCTTGCTGTGTTGACTGATGTTGGGACCTGTTTACTTGTGATTCTCAATAGCATGTTAATTTTACAAGAGAAACCAAAATATGAAAGAAAATCTACAAGTTCTAAATATGGCACTTTCTTGGAAGATGTGACCACGACTTTACTTGACAATGAAAGTAACAGCACTAAGAACCAAGGGCTTCTTACATCTGAAGAGTGTGGTAAAGATTGCTGTAAAGACGATACTTATCGTGTAGAAACTACAAGCAAGAATGAATCTTCTGGACGTTTGAAGATGAGCTCACTCAAGGGAAACCAAAGCGGAAACTTGGTCTCTATTGAAGTGCATATAGTGAAACCCTGCAATGGTTGTTGTCTAAGTGAAGTCAAAATGTGTGAGGACTCCACATGCAGAACAAACAATAGTTCTGATTGTTGCCAAGAGCAATCTAAGACTGAAAAATGTGGCACTCACTCTATTGCCATAGAAGATTCCAGCATTGCTTCATTGGAGTCTGATGGCCTTAAGGACAAGTCTGTGGATATTTCAGAGTCGTCAGGGACAAAAGGGATTCCAAAGTGCTGCAATAACACATGCTGTAATGATTTTAACAATATGAATAGCCTTAGCCTTAGCCAGCCAGAAATTATTATAGAGTGA 2868 0.4069 MVDNMKRSSFEVLGMCCATEAALVERILKPLHGVKHVSVIVPTRTVTVVHDVLFISVLQIASFIASIYENSSCQTLVEVLASDALNAARLEASLKVQGETDNEKKWPDLPTMVCGLFLALSFLKYVYHPLEWLALGSVFIGFPKVLLRAIASIRALTLNINILVLLAVCSTAALQDFWEAGVIIFLFSIAQWLETRATHKVTTAGLLFVYTPLLSCDSEEFVFSSLWDTLITVKLFNTHLILQENISFEYVMAKVAMSSLTSMAPQKAVIAESGERVDVNDVKINTILAVKAGDAIPLDGIVVEGKCEVDEKMLTGESLPVIKELDSIVWAGTINVNGYISIKTTVLAKDTVVARMSKLVEEASSRKSRTQRFIDNFAKYYIPSVVLISASIAVVPAALEVPDIKPWFHLAIVVLLSACPCALILSTPVAIFCALTKAAISGLLLKGGDYIETLSGIKTVAFDKTGTITRGEFTVTDFSVVDDISIETLLYWVSSIESKSSHPMAAALVEYGMSRSVRPIPENVENFDNFAGEGVFGRIDGKDIYIGNRRIGARADSKRVDCHLQFQSHEISSPKQYCGPTLVGVFSLVDTCRSGALEAIEQLKLLGVRSVLLTGDSTQAAMYVHSQLNHLLDIVHAELLPVEKAVIIENWKKDGLTAMIGDGINDAPALATADIGISMGISGSALANETGNAILMSNDIQKIPEAIRLARKTTRKLIENVIISIGFKSAVLALAISGYPIVWLAVLTDVGTCLLVILNSMLILQEKPKYERKSTSSKYGTFLEDVTTTLLDNESNSTKNQGLLTSEECGKDCCKDDTYRVETTSKNESSGRLKMSSLKGNQSGNLVSIEVHIVKPCNGCCLSEVKMCEDSTCRTNNSSDCCQEQSKTEKCGTHSIAIEDSSIASLESDGLKDKSVDISESSGTKGIPKCCNNTCCNDFNNMNSLSLSQPEIIIE 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02973 955 FunFam Putative cadmium/zinc-transporting ATPase 3 472 592 - -
Spst9g02973 955 Gene3D - 452 711 IPR023214 -
Spst9g02973 955 Gene3D - 1 94 - -
Spst9g02973 955 NCBIfam heavy metal translocating P-type ATPase 252 762 IPR027256 GO:0006812|GO:0016020|GO:0019829
Spst9g02973 955 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 252 767 - -
Spst9g02973 955 SUPERFAMILY HAD-like 459 761 IPR036412 -
Spst9g02973 955 SUPERFAMILY Calcium ATPase, transmembrane domain M 160 455 IPR023298 -
Spst9g02973 955 CDD HMA 10 52 IPR006121 GO:0046872
Spst9g02973 955 Gene3D - 472 592 IPR023299 GO:0000166
Spst9g02973 955 Pfam E1-E2 ATPase 267 439 - -
Spst9g02973 955 ProSitePatterns E1-E2 ATPases phosphorylation site. 463 469 IPR018303 -
Spst9g02973 955 CDD P-type_ATPase_HM 111 762 - -
Spst9g02973 955 PRINTS P-type cation-transporting ATPase superfamily signature 310 324 - -
Spst9g02973 955 PRINTS P-type cation-transporting ATPase superfamily signature 461 475 - -
Spst9g02973 955 PRINTS P-type cation-transporting ATPase superfamily signature 684 696 - -
Spst9g02973 955 PRINTS P-type cation-transporting ATPase superfamily signature 660 679 - -
Spst9g02973 955 PRINTS P-type cation-transporting ATPase superfamily signature 584 595 - -
Spst9g02973 955 PRINTS P-type cation-transporting ATPase superfamily signature 606 616 - -
Spst9g02973 955 NCBIfam HAD-IC family P-type ATPase 253 482 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02973 955 NCBIfam HAD-IC family P-type ATPase 581 741 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02973 955 FunFam Copper-transporting ATPase 1, putative 251 364 - -
Spst9g02973 955 SUPERFAMILY Calcium ATPase, transduction domain A 275 360 IPR008250 -
Spst9g02973 955 FunFam Putative cadmium/zinc-transporting ATPase 3 2 70 - -
Spst9g02973 955 PRINTS H+-transporting ATPase (proton pump) signature 692 717 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02973 955 PRINTS H+-transporting ATPase (proton pump) signature 660 676 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02973 955 SFLD p-type atpase 444 713 IPR044492 -
Spst9g02973 955 ProSiteProfiles Heavy-metal-associated domain profile. 6 72 IPR006121 GO:0046872
Spst9g02973 955 Gene3D - 250 364 - -
Spst9g02973 955 Pfam haloacid dehalogenase-like hydrolase 457 674 - -
Spst9g02973 955 SFLD Haloacid Dehalogenase 444 713 - -
Spst9g02973 955 SUPERFAMILY HMA, heavy metal-associated domain 2 66 IPR036163 GO:0046872
Spst9g02973 955 ProSitePatterns Hypothetical cof family signature 2. 660 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02973 Spst-Chr9 63810080 63824381 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02973 5 816 Primary Pumps ATPases AT2G19110 52.068 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02973 K01534 - gmx:100815324 1428.69