Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02969 ATGACACTCACTATGGATAAATTTCTGAGCGAGATGGAAAAGGAGAAGCCAATGAGGTTTACTGAACAGCATCTAAAAATTGCGACTGATAACTATTCATACTTGTTGGGGTCAGGAGGTTTTGGAAAAGTTTGTAAGGGAATATTCAGTGATGGAACCATTGTAGCTGTGAAGATACTACATGCGCTTTCTCACGAGAGAATTGAGGAGCAGTTTATGGCTGAAGTGGGAACAATTGGAAAAATTCATCATTTCAACCTGGTTCGGCTCTACGGATTTTGTTTCGAAAGAAACTTCACAGCACTGGTTTATGAGTTCATGGGAAATGGTTCTCTTGACAAATTCTTGTTTGATCGTAACAAAGCCATAGGTTTTGAAAAGCTTTATGAGATTGCTGTTGGGACAGCCAAAGGCATTGCTTACTTGCATGAAGAGTGTCAACAAAGAATTATCCACTATGACATCAAACCAGGAAATATTCTCTTGGACAGAAACTTCAATGCTAAAGTTGCTGATTTTGGATTAGCCAAACTCTGCAACAGGGACAATACTCATACTACTCTGACTAAGGGTAGAGGGACTCCTGGTTATGCTGCACCTGAGCTTTGGTTGCCAAATTTTCCAGTAACTCACAAGTGTGATGTGTACAGCTTTGGGATGCTGTTATTTGAAATCCTTGGAAGGAGAAGAAACTTTGACATTGACCTTGCTGAAAGTCAGGAGTGGTTTCCAATGTGGGTTTGGAAAAAGTTTGAGGCTGAAGAAACAGAAGAATTAATAGTAGCATGTGGAATGGAGGATCAAAATAAAGAGACTGCAGAAAGAATGATAAAGGTAGCTCTGTCATGTGTTCAGTACAAGCAAGAATCAAGACCTATAATGAGTGTTGTGGTGAAAATGTTAGAAGGTTCAGTTGAAATTCCAAAACCTCTAAACCCTTTTCCGCATCTTTTTCATGAGACTTTTCTACCAGCATCACATACCAACACTTATACAAGTACCTTTCCAGGTTCTTCAGAGATGATAACAGAATCAAGCCATGAAGCTTCTTCCCCTATTGAGACAAAGTTGGAGATTGAATCAGCCTCTACCTAA 1095 0.3954 MTLTMDKFLSEMEKEKPMRFTEQHLKIATDNYSYLLGSGGFGKVCKGIFSDGTIVAVKILHALSHERIEEQFMAEVGTIGKIHHFNLVRLYGFCFERNFTALVYEFMGNGSLDKFLFDRNKAIGFEKLYEIAVGTAKGIAYLHEECQQRIIHYDIKPGNILLDRNFNAKVADFGLAKLCNRDNTHTTLTKGRGTPGYAAPELWLPNFPVTHKCDVYSFGMLLFEILGRRRNFDIDLAESQEWFPMWVWKKFEAEETEELIVACGMEDQNKETAERMIKVALSCVQYKQESRPIMSVVVKMLEGSVEIPKPLNPFPHLFHETFLPASHTNTYTSTFPGSSEMITESSHEASSPIETKLEIESAST 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02969 364 Gene3D Transferase(Phosphotransferase) domain 1 107 309 - -
Spst9g02969 364 PANTHER OS07G0415500 PROTEIN 8 313 - -
Spst9g02969 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Spst9g02969 364 ProSiteProfiles Protein kinase domain profile. 30 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02969 364 SMART serkin_6 30 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02969 364 FunFam Putative receptor-like protein kinase 107 309 - -
Spst9g02969 364 Gene3D Phosphorylase Kinase; domain 1 4 106 - -
Spst9g02969 364 ProSitePatterns Protein kinases ATP-binding region signature. 36 58 IPR017441 GO:0005524
Spst9g02969 364 Pfam Protein tyrosine and serine/threonine kinase 35 301 IPR001245 GO:0004672|GO:0006468
Spst9g02969 364 MobiDBLite consensus disorder prediction 342 364 - -
Spst9g02969 364 SUPERFAMILY Protein kinase-like (PK-like) 11 302 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02969 Spst-Chr9 63778330 63779424 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02969 19 335 Receptor kinase-like Gene Family AT5G38280 41.049 1.25e-75 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Spst9g02969 PK_Tyr_Ser-Thr 7.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02969 - - gmx:100819737 600.512