Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02968 ATGAGTTTTCAGTTTCCTTCTCCATCTGACGATTTTCAGACTCAGGCACAGAACCAGTTTGACCATTTTATGGAATGGACAGTAATAGCGTCCATTGCTTCTGGAGTGGTGGGGCTGATAGCTACTATAGCAGTAGTATATGCCATTATTCAATGCTTAAAGAAGGCGGGAGAAGCAATTCCTGCATATGCCCAGCTTCCGACTACAGAGAAGGATCATAAAGCATCAAAGTCATTTCCTTCGAGTAGAGAAGTTGAAGTAGTAATAGAACCAGCTTCCAAGGTTCAAGGTTCTAAAACTGAGTTTGCAACAATGGAAAGATTCCTCAGCAACATTAACAAGGAGAAACCTATCAGATTCTCTCCTGAGGAGCTAGATATAATTACATGGGACTACTCAACCATATTGGGTTCAGGTGCTTTTGGGGTTGTCTACAAAGGAGAATTGTCCAATGGAGACATTGTGGCTGTGAAAGTTATCAACAGTTTGGACATGGGAATGGAAGAACAATTAAAAGCAGAAGTTGGCACCCTTGGAAGAACTTACCATGTCAATCTAGTCAGGCTTTATGGATTCTGCTTCCACCGTGACAAGCGAGCTCTTGTTTATGAGTTTGTGGAAAATGGGTCTCTGGACAAGCACTTGTTTGGCAGCCAGAACCATGACATTGAGTTCGGGAAGCTTCTTGAGATTGCAATTGGAACAGCAAAAGGTATCGCTTATTTACATGAAGAGTGTCAAAAAAGAATCATTCATTATGATATTAAACCGGAGAATGTTCTTCTTGACATGAACTTGGAGCCAAAGGTAGCAGATTTTGGCCTGGCAAAGCTTTGCAACAGAGATAATGATGTTGCAGTCAACACACACTTTAGAGGAACAAGGGGATATGCTGCACCAGAAATGTGGAAGCCTTTTCCAGTGACTCACAAGTGCGATGTTTACAGTTTTGGTATTCTCCTCTTTGAAATGGTTGGGAGGAGAAGGCATTTTGATGATAACTACGGAGAATCACAACAATGGCTTCCACAATATACATGGGATATGTTTGAGAATAATGAGTTATCCGTAATGCTTTCACTTTATGGAATGGAAGAGAAAGACAGGGAGAAAGGTGAGAGAATGTCAAAGGTGGCTCTGTGGTGTGTTCAGTATAAACCAGATGATAGACCTCTCATGAGTACAGTGGTGAAGATGTTAGAGGGTGAAATTGAAATTTCTCCACCTCCATTTCCCTTCCAAAACCTGGTGTCCGTTAAGCCAAACTTGACTCGACAAGGTAGTAGTACTGCAGATTCAGATACTACCTTGTCAAGGGAGACATCATACCCTGAATCTGGCTCCAAAATCAAGCGCAAAACATTTGAGATCGAAGAACGAACCTAA 1386 0.417 MSFQFPSPSDDFQTQAQNQFDHFMEWTVIASIASGVVGLIATIAVVYAIIQCLKKAGEAIPAYAQLPTTEKDHKASKSFPSSREVEVVIEPASKVQGSKTEFATMERFLSNINKEKPIRFSPEELDIITWDYSTILGSGAFGVVYKGELSNGDIVAVKVINSLDMGMEEQLKAEVGTLGRTYHVNLVRLYGFCFHRDKRALVYEFVENGSLDKHLFGSQNHDIEFGKLLEIAIGTAKGIAYLHEECQKRIIHYDIKPENVLLDMNLEPKVADFGLAKLCNRDNDVAVNTHFRGTRGYAAPEMWKPFPVTHKCDVYSFGILLFEMVGRRRHFDDNYGESQQWLPQYTWDMFENNELSVMLSLYGMEEKDREKGERMSKVALWCVQYKPDDRPLMSTVVKMLEGEIEISPPPFPFQNLVSVKPNLTRQGSSTADSDTTLSRETSYPESGSKIKRKTFEIEERT 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02968 461 Pfam Protein kinase domain 133 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02968 461 ProSitePatterns Protein kinases ATP-binding region signature. 136 158 IPR017441 GO:0005524
Spst9g02968 461 Gene3D Phosphorylase Kinase; domain 1 92 205 - -
Spst9g02968 461 FunFam Putative receptor-like protein kinase 206 408 - -
Spst9g02968 461 SMART serkin_6 130 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02968 461 MobiDBLite consensus disorder prediction 424 461 - -
Spst9g02968 461 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 25 411 - -
Spst9g02968 461 ProSiteProfiles Protein kinase domain profile. 130 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02968 461 MobiDBLite consensus disorder prediction 445 461 - -
Spst9g02968 461 Gene3D Transferase(Phosphotransferase) domain 1 206 407 - -
Spst9g02968 461 MobiDBLite consensus disorder prediction 424 444 - -
Spst9g02968 461 SUPERFAMILY Protein kinase-like (PK-like) 114 401 IPR011009 -
Spst9g02968 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02968 Spst-Chr9 63775755 63777375 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02968 119 413 Receptor kinase-like Gene Family AT5G38280 41.776 3.18e-76 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Spst9g02968 Pkinase 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02968 - - gmx:100820269 712.605