Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02966 ATGGACAATTTTTTGAGTAAAATGGAAAGAGAAAAGCCAATCAGGTTTACTGCTGAGCTGCTCAGGATTGCAACAGATAATTATTCTACATCATTGGGGTCAGGAGGTTTTGGAGAAGTTTATGAAGGAAATTTGAGAGATGGAACAACTGTGGCTGTGAAGGTTCTACGTGCAAATTCTGATAAAAGAATTGAGGAACAGTTTATGGCAGAAGTGAGTACAATTGGAAAAATCCATCATTTCAATCTAGTTAAGTTGCATGGATTTTGCTTTGAAAAAGGCCTGAGAGCACTGGTTTATGAATACATGGGGAATGGATCTCTTGACAAGTATCTGTTTAATAAAAACAAGAACCTTGGATATGAAAAGTTGCATGAGATTGCTGTTGGGACAGCCAGAGGCATTGCGTACTTGCATGAAGATTGTCAGCAAAGGATAATCCACTATGACATCAAACCAGGAAATATTCTCTTGGACAGAAACTTCAATCCTAAAGTTGCTGATTTTGGATTGGCCAAACTCTGCAACAGGGACAATACTCATATAACTATGACAGGAGGTAGGGGCACTCCAGGTTATGCTGCACCTGAGCTTTGGATGCCATTTCCTGTGACTCACAAGTGTGATGTTTACAGCTTTGGAATGCTGCTATTTGATATCATAGGCAGGAGAAGAAACCTTGAAATTAACCTTTCAGAGAGCCAAGAGTGGTTTCCAGTATGGGCTTGGAAAAGATTTGATGCTGGAGAATTTGAAGAATTAATAACTGTTTGTAAGATTGAGGAGAGGTACAAGAAAATGGCTGAAAGAATGGTGAAGGTAGCTTTGTTTTGTGTTCAATATAGGCCAGAATCAAGACCAATTATGAGTGATGTGGTGAAAATGTTGGAAGGTTCAGTGGAAATTGCTAAACCATTGAACCCTTTTCAGTACATGATAGATGGAACCTTCCCAGGTCATTCTGTCCATACATCCATGACTGATGTTAATACAAGCGTCAATTCCAGCTCTTCTGTTATGGTGACCCAACCTGGCATTGTATATGATATTCCTCTCATGAGAAATGATATTGAATTGGTCTCTAGCATAGGAGTATAA 1098 0.3916 MDNFLSKMEREKPIRFTAELLRIATDNYSTSLGSGGFGEVYEGNLRDGTTVAVKVLRANSDKRIEEQFMAEVSTIGKIHHFNLVKLHGFCFEKGLRALVYEYMGNGSLDKYLFNKNKNLGYEKLHEIAVGTARGIAYLHEDCQQRIIHYDIKPGNILLDRNFNPKVADFGLAKLCNRDNTHITMTGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFDIIGRRRNLEINLSESQEWFPVWAWKRFDAGEFEELITVCKIEERYKKMAERMVKVALFCVQYRPESRPIMSDVVKMLEGSVEIAKPLNPFQYMIDGTFPGHSVHTSMTDVNTSVNSSSSVMVTQPGIVYDIPLMRNDIELVSSIGV 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02966 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Spst9g02966 365 PANTHER OS07G0415500 PROTEIN 5 308 - -
Spst9g02966 365 ProSiteProfiles Protein kinase domain profile. 26 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02966 365 Pfam Protein tyrosine and serine/threonine kinase 29 296 IPR001245 GO:0004672|GO:0006468
Spst9g02966 365 Gene3D Phosphorylase Kinase; domain 1 3 102 - -
Spst9g02966 365 SUPERFAMILY Protein kinase-like (PK-like) 8 297 IPR011009 -
Spst9g02966 365 Gene3D Transferase(Phosphotransferase) domain 1 103 306 - -
Spst9g02966 365 ProSitePatterns Protein kinases ATP-binding region signature. 32 54 IPR017441 GO:0005524
Spst9g02966 365 SMART serkin_6 26 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02966 365 FunFam Putative receptor-like protein kinase 103 304 - -
Spst9g02966 365 FunFam serine/threonine-protein kinase PBS1-like 2 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02966 Spst-Chr9 63772224 63773321 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02966 15 318 Receptor kinase-like Gene Family AT5G38280 42.308 3.66e-79 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Spst9g02966 PK_Tyr_Ser-Thr 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02966 - - vun:114162625 637.876