Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02964 ATGACACTTGCTATGGATAAATTTTTGAATGATATGGAAAGGGAGAAGCCAATCAGGTTTACTGACCAACATCTAAGGATTGCAACTGATAACTACTCTTACTTGTTGGGGTCAGGAGGTTTTGGATCAGTCTATAAGGGAATTTTTAGTGATGGAACCATTGTAGCTGTGAAGGTTCTACATGGGCGTTCAGATAAAAGAAATGAGGAGCAGTTTATGGCTGAAGTGGGAACGATTGGAAAAATTCATCACTTCAATCTGGTTCGACTCTATGGATTTTGTTTCGAAAGAAACTTGATAGCTCTAGTTTATGAGTACATGGGGAATGGCTCTATTGACAACTATCTGTTTAATCAAAACAAGGCCATAGGATTTGAAAGGCTTCATGAGATTGCAGGTAGGGGGACTCCTGGTTATGCTGCACCTGAACTTTGGATGCCTAATTTTCCTGTTACTCACAAGTGTGATGTTTACAGCTTTGGAATGCTGTTATTTGAAATCATAGGCAGAAGGAGAAACCTTGATATTGAACTTGTTGAAAGCCAGGAGTGGTTTCCAATGTTTGTATGGAAAAAAATTTATGCTGGAGAATTGGAGGAGCTGATAATAGCATGTGGGATAGAGGAGAAATATGGAGAGATAACGGAGAGAATGGTTAATGTTGCTCTATCGTGTGTTCAGTATAGGCCAGATTCAAGGCCTATAATGAGTGATGTGGTGAAAATGTTGGAAGGTTCAGTGGAAATTCCAAAACCTTTGAACCCATTTCAGCAATTTATGGATGGGAATTTCACTGCTCATCTAATCCAAGTGCCACTGATCTACACTACAGATACTACCAGTTCTTCTGTTGTAGTAACTGACTCTAGCACTGTGAAGCAAAGAAGAAAAGAGAAGCTAGCGTAG 906 0.3962 MTLAMDKFLNDMEREKPIRFTDQHLRIATDNYSYLLGSGGFGSVYKGIFSDGTIVAVKVLHGRSDKRNEEQFMAEVGTIGKIHHFNLVRLYGFCFERNLIALVYEYMGNGSIDNYLFNQNKAIGFERLHEIAGRGTPGYAAPELWMPNFPVTHKCDVYSFGMLLFEIIGRRRNLDIELVESQEWFPMFVWKKIYAGELEELIIACGIEEKYGEITERMVNVALSCVQYRPDSRPIMSDVVKMLEGSVEIPKPLNPFQQFMDGNFTAHLIQVPLIYTTDTTSSSVVVTDSSTVKQRRKEKLA 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02964 301 Gene3D Phosphorylase Kinase; domain 1 5 106 - -
Spst9g02964 301 FunFam serine/threonine-protein kinase PBS1-like 4 106 - -
Spst9g02964 301 ProSiteProfiles Protein kinase domain profile. 30 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02964 301 Gene3D Transferase(Phosphotransferase) domain 1 117 251 - -
Spst9g02964 301 Pfam Protein tyrosine and serine/threonine kinase 35 132 IPR001245 GO:0004672|GO:0006468
Spst9g02964 301 Pfam Protein tyrosine and serine/threonine kinase 139 243 IPR001245 GO:0004672|GO:0006468
Spst9g02964 301 SUPERFAMILY Protein kinase-like (PK-like) 20 280 IPR011009 -
Spst9g02964 301 ProSitePatterns Protein kinases ATP-binding region signature. 36 58 IPR017441 GO:0005524
Spst9g02964 301 PANTHER OS07G0415500 PROTEIN 6 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02964 Spst-Chr9 63763843 63768965 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02964 20 252 Receptor kinase-like Gene Family AT5G39030 33.555 5.58e-40 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Spst9g02964 PK_Tyr_Ser-Thr 8.6e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02964 - - gmx:100815859 389.037