Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02961 ATGCATGAGTTCACGTGTCTCTTCTTCCATTTCCATTCTTCTTCAATTCTCTCAACAGCAGCAACTACAACTAACCGCCCTCTTCTTACTTCACCACTCCTTCACTCCCTTCTCCATGGGCTGAACTTCAACCCTTTTCCTTCAATGGAGTGGGACAGCAATTCCGATCTCAGCGCCGACGACGACGATGACGTTTCCTTTAACCTCAACGACGACGATGAGAACGGCGTCGGGCCCCTTCCTTTCCCCGTCCTCCAGACCGCTCCCTGCGGCTTCGTCGTCACCGATGCGCTCGAGCCCGACCATCCTATTATATACGTCAACGCCGTTTTCGAGATGGTCACTGGCTACCGCGCAGAAGAAGTGCTCGGTCGCAACTGGTTAGTGCCTCTGTATAGATTTCTCCTCCTTAGGTTTAGGTTTTTCGCTCTGCCTCCAAACCCTAGGAAACCGTGTTATGTTGTGTAA 468 0.5171 MHEFTCLFFHFHSSSILSTAATTTNRPLLTSPLLHSLLHGLNFNPFPSMEWDSNSDLSADDDDDVSFNLNDDDENGVGPLPFPVLQTAPCGFVVTDALEPDHPIIYVNAVFEMVTGYRAEEVLGRNWLVPLYRFLLLRFRFFALPPNPRKPCYVV 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02961 155 Gene3D PAS domain 82 141 - -
Spst9g02961 155 PANTHER PROTEIN TWIN LOV 1 92 127 - -
Spst9g02961 155 CDD PAS 88 128 IPR000014 -
Spst9g02961 155 SUPERFAMILY PYP-like sensor domain (PAS domain) 84 129 IPR035965 -
Spst9g02961 155 ProSiteProfiles PAS repeat profile. 84 132 IPR000014 -
Spst9g02961 155 Pfam PAS fold 84 126 IPR013767 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02961 Spst-Chr9 63745638 63748325 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02961 85 126 AGC Kinase Gene Family AT3G45780 52.381 2.51e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02961 K12115 - gmx:100805523 122.864