Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02957 ATGGCTGGGGACAAGGGAACCATCACCCTGGAAGAGATCAGGAATGAAACTGTTGATCTGTGTGTATCACCCATCAATCTATCATGGGTGTCTCTCTCTGTCTGTGCCTTGTTTGGTGGGAAGGAATTTAAAGAACGTATTCCAATTGATGAAGTGTTTGAGCAATTGAAATGTACAAGGGAAGGTTTGTCCTCCACAGAAGGAGAGAACAGGCTTCAAATATTTGGACCCAACAAACTAGAGGAAAAAAAGGAAAGCAAATTTCTCAAATTTCTTGGGTTCATGTGGAATCCTCTTTCATGGGTCATGGAGGCTGCTGCAATCATGGCAATTGCTCTTGCAAATGGTGAAGGGAAGCCTCCAGATTGGCAAGATTTTGTGGGTATTGTGTGCTTGTTGCTGATCAACTCCACTATCAGTTTCATTGAAGAAAACAATGCTGGAAATGCTGCTGCAGCCCTCATGGCTGGTCTTGCCCCTAAAACAAAGGTTCTTAGAGATGGTAAATGGAGTGAGCAAGAAGCTGCAATTCTAGTCCCGGGAGACATAATAAGCATCAAGCTAGGTGACATTATACCTGCTGATGCTCGTCTTCTTGAGGGTGATCCTCTGATGGTTGATCAAGCAGCTCTGACTGGGGAGTCTCTTCCAGTTACTAAGCATCCAGGGCAAGAAGTGTTCTCTGGCTCAACTTGCAAACAAGGAGAAATTGAAGCCGTTGTGATTGCAACTGGTGTGCACACATTCTTTGGAAAGGCAGCACACTTGGTGGATAGCACCAACCAAGTTGGACATTTCCAGAAGGTTCTTACAGCCATTGGGAACTTCTGCATCTGTTCCATTGCTGTTGGTATGCTAACTGAGATCATAGTGATGTACCCAATTCAGCGCCGCAAGTACAGGGAGGGAATTGACAACCTGTTGGTGCTCTTGATTGGAGGTATCCCCATTGCTATGCCTACCGTGTTGTCTGTGACAATGGCCATTGGTTCTCACAAGCTCTCTCAGCAAGGAGCCATCACCAAGAGAATGACAGCCATAGAAGAAATGGCAGGCATGGATGTCCTTTGCAGTGACAAAACAGGAACACTCACCCTCAACAAACTCACTGTTGACAAGAACTTAGTTGAGGTCTTTGCCAAGGGTGTAGACAAGGATCATGTGATCCTTCTAGCTGCCAGGGCTGCCAGGACTGAAAACCAGGATGCCATAGATGCTGCCATTGTTGGAATGCTTGCTGATCCTAAAGAGGCAAGGGCTGGGATAAGAGAGGTGCACTTTTTACCATTCAATCCTGTTGACAAGAGGACTGCTTTGACTTACATTGATGCAAATGGAAATTGGCACAGGTCAAGCAAAGGTGCTCCTGAGCAGATTATGGCCCTGTGTAACCTCAGGGAAGACGCTAAGAAGAAGGTTCATGCTATCATTGACAAGTTTGCAGAAAGAGGGCTCCGTTCACTTGCTGTTGCTAGACAGGAAGTTCCTGAGAAGACAAAAGAAAGTGCTGGTGCTCCATGGCAGTTTGTTGGTTTGTTGTCACTGTTTGATCCCCCTAGGCATGACAGTGCTGAAACCATTCGCCGAGCTCTTAACCTTGGTGTAAATGTTAAGATGATTACTGGTGATCAACTTGCCATAGCTAAGGAAACAGGAAGGAGACTTGGAATGGGAACAAATATGTACCCATCTGCTACATTGCTTGGTCAAGACAAGGATGCAAGTATTGCTGCACTCCCTGTAGAAGAGTTGATTGAGAAGGCAGATGGATTTGCTGGTGTTTTTCCAGAGCACAAATATGAAATCGTTAAGAAGTTGCAAGAGAGGAAGCACATTTGTGGCATGACTGGAGATGGTGTCAACGACGCTCCTGCATTGAAGAAGGCTGATATTGGAATTGCTGTTGCTGATGCTACTGATGCAGCAAGAAGTGCTTCTGACATTGTCTTGACCGAACCTGGATTGAGTGTTATTATTAGTGCAGTCTTAACTAGCAGAGCTATTTTCCAAAGAATGAAGAACTACACGATATATGCAGTATCTATCACAATCCGTATAGTGTTTGGCTTCATGTTCATTGCACTGATCTGGCAATTTGACTTCTCCCCTTTCATGGTTTTGATTATTGCCATCCTGAATGATGGGACAATAATGACAATTTCAAAGGACAGGGTTAAGCCATCTCCCTTGCCGGATAGCTGGAAACTGAAAGAAATATTTGCTACTGGGGTTGTGCTTGGAGGTTACTTGGCACTGATGACTGTTATATTCTTCTGGGCAATGAAAAAGACTAGCTTCTTCTCTGACAAATTTGGAGTTAGACCGCTTAATGACAGTATAGATGAAATGACCGCAGCTTTGTATCTACAAGTCAGTATAGTGAGCCAGGCTTTGATATTTGTAACCCGTTCGCGCAGCTGGTCCTTTGTTGAACGCCCTGGAGTGCTGTTAGTGAGCGCTTTCTTTATTGCTCAGCTGCTTTTGGCCTTGCAGGTTGCTACATTAATAGCAGTGTATGCTAACTGGGGCTTTGCAAGGATCAAAGGAATTGGTTGGGGTTGGGCAGGAGTGATTTGGCTCTACAGTATTGTTTTCTATGTCCCTCTTGATTTCATGAAGTTTGGCATCCGCTACATCTTGAGTGGCAAAGCTTGGTTGAATCTCCTAGAGAACAAGACTGCCTTCACCACCAAGAAAGACTATGGTAAGGAAGAGAGAGAAGCTCAATGGGCTCATGCTCAGAGAACCCTTCATGGACTTCAACCACCAGAAACTTCTGGTATCTTCAATGAGAAGAGCAGTTATAGAGAATTGTCTGAGATTGCCGAGCAGGCCAAGAGAAGAGCTGAAGTTGCAAGGCTTCGTGAGCTTCACACACTTAAGGGACATGTTGAGTCTGTGGTGAAGCTGAAAGGTTTGGACATCGACACAATCCAGCAGCATTACACCGTGTAA 2955 0.4497 MAGDKGTITLEEIRNETVDLCVSPINLSWVSLSVCALFGGKEFKERIPIDEVFEQLKCTREGLSSTEGENRLQIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGEGKPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIIPADARLLEGDPLMVDQAALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMLTEIIVMYPIQRRKYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDKDHVILLAARAARTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDANGNWHRSSKGAPEQIMALCNLREDAKKKVHAIIDKFAERGLRSLAVARQEVPEKTKESAGAPWQFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSATLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWQFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFFWAMKKTSFFSDKFGVRPLNDSIDEMTAALYLQVSIVSQALIFVTRSRSWSFVERPGVLLVSAFFIAQLLLALQVATLIAVYANWGFARIKGIGWGWAGVIWLYSIVFYVPLDFMKFGIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWAHAQRTLHGLQPPETSGIFNEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02957 984 FunFam Plasma membrane ATPase 369 516 - -
Spst9g02957 984 SUPERFAMILY Calcium ATPase, transmembrane domain M 46 880 IPR023298 -
Spst9g02957 984 CDD P-type_ATPase_H 62 874 IPR006534 GO:0008553|GO:0016020|GO:0120029
Spst9g02957 984 ProSitePatterns E1-E2 ATPases phosphorylation site. 359 365 IPR018303 -
Spst9g02957 984 FunFam ATPase 4 plasma membrane-type 601 848 - -
Spst9g02957 984 SUPERFAMILY HAD-like 353 663 IPR036412 -
Spst9g02957 984 Gene3D - 369 516 IPR023299 GO:0000166
Spst9g02957 984 Gene3D - 160 244 - -
Spst9g02957 984 SFLD Haloacid Dehalogenase 339 667 - -
Spst9g02957 984 FunFam Plasma membrane ATPase 160 244 - -
Spst9g02957 984 PRINTS H+-transporting ATPase (proton pump) signature 473 491 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02957 984 PRINTS H+-transporting ATPase (proton pump) signature 788 809 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02957 984 PRINTS H+-transporting ATPase (proton pump) signature 647 672 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02957 984 PRINTS H+-transporting ATPase (proton pump) signature 588 604 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02957 984 PRINTS H+-transporting ATPase (proton pump) signature 616 632 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02957 984 NCBIfam plasma-membrane proton-efflux P-type ATPase 62 838 IPR006534 GO:0008553|GO:0016020|GO:0120029
Spst9g02957 984 Gene3D - 122 848 - -
Spst9g02957 984 Pfam E1-E2 ATPase 159 336 - -
Spst9g02957 984 Gene3D - 933 984 - -
Spst9g02957 984 FunFam Plasma membrane ATPase 508 664 - -
Spst9g02957 984 Pfam Cation transporter/ATPase, N-terminus 47 109 IPR004014 -
Spst9g02957 984 SFLD p-type atpase 339 667 IPR044492 -
Spst9g02957 984 NCBIfam HAD-IC family P-type ATPase 129 377 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02957 984 NCBIfam HAD-IC family P-type ATPase 591 705 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst9g02957 984 SUPERFAMILY Calcium ATPase, transduction domain A 160 257 IPR008250 -
Spst9g02957 984 Coils Coil 935 955 - -
Spst9g02957 984 PANTHER CALCIUM-TRANSPORTING ATPASE 46 916 - -
Spst9g02957 984 Pfam haloacid dehalogenase-like hydrolase 353 630 - -
Spst9g02957 984 SMART Cation_ATPase_N_a_2 43 115 IPR004014 -
Spst9g02957 984 PRINTS P-type cation-transporting ATPase superfamily signature 533 543 - -
Spst9g02957 984 PRINTS P-type cation-transporting ATPase superfamily signature 616 635 - -
Spst9g02957 984 PRINTS P-type cation-transporting ATPase superfamily signature 357 371 - -
Spst9g02957 984 PRINTS P-type cation-transporting ATPase superfamily signature 639 651 - -
Spst9g02957 984 PRINTS P-type cation-transporting ATPase superfamily signature 511 522 - -
Spst9g02957 984 PRINTS P-type cation-transporting ATPase superfamily signature 207 221 - -
Spst9g02957 984 Gene3D - 354 653 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02957 Spst-Chr9 63708480 63716200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02957 9 984 Primary Pumps ATPases AT4G30190 82.557 0.0 1630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02957 K01535 - gmx:100804422 1747.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03494 3 84799787 84811522 Spst9g02957 9 63708480 63716200 PCT