Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02954 ATGGAGGGTCAACCTGCTAAACGCAGACGTGTATACTCACTTGAACCCAACAAAGTGGAACAAGCAGCTTTTGCTAGAAACTACATGAACTATTTGGTGCCAGCATTGATGAAGATCAAGGAGAGAAGCTCTTCAGAGCGTAGTGGCCACTGTGATATTCAGAATGTTGTCAAGTATGAAGTGGACATGGCAATGGTGCACTCAGCCCAGGGTTTTGCATGGAGCAATGCTCTAAGTGTGAAGCTTCAAAGGGGTAGAGCCAATGCAGATAGTGGCAGAACCAGTTTTGGTGAAAACAAGGCTGGTGAAGGTTCATCAAGGATTTATGGCCAAAATGGTGAAATGGTGCCATTGGATCAGTTCCCTTCAGACCCTAGTTTGAAGCCTAGTAATAAGCACAAGGGCATGCCTGAAATAAAAAGGGGTTTGAGAGAAGAAGATGGTGATGGTGAAGATGAAGACGAGGTCATCAATGACCAGTTGAAGAGCCTCAGAAGGTTGATACCTGGGGGAGAAGAAATGTGTAGTGAACTAATGGTGACAGAACTACAAAGCTATGTAAGCTGTTTGCAAATGCAGAATCATGATATGAGTAATCTTTTCTTTTCTTTTCTTTTTCCACCACCACCATTGCTGGCCTAA 642 0.4377 MEGQPAKRRRVYSLEPNKVEQAAFARNYMNYLVPALMKIKERSSSERSGHCDIQNVVKYEVDMAMVHSAQGFAWSNALSVKLQRGRANADSGRTSFGENKAGEGSSRIYGQNGEMVPLDQFPSDPSLKPSNKHKGMPEIKRGLREEDGDGEDEDEVINDQLKSLRRLIPGGEEMCSELMVTELQSYVSCLQMQNHDMSNLFFSFLFPPPPLLA 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02954 213 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 22 200 IPR044660 GO:0006355
Spst9g02954 213 MobiDBLite consensus disorder prediction 86 153 - -
Spst9g02954 213 MobiDBLite consensus disorder prediction 131 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02954 Spst-Chr9 63676878 63677963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02954 1 82 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 48.193 9.98e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02954 - - gmx:100805301 286.189