Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02942 ATGTCAGACAACAACAATCCTCAAATAAAGTACGATGTTTTTGTTAGCTTCAGGGGCAAGGACATCCGTGACGGGTTTCTTAGCCATTTGACTCGGGCATTTCACACCAAGCAAATAAATGCCTTTGTTGACGATAAACTTGAGAAGGGAGAAGAAATATGGCCATCACTTGTTGCAGCTATTGAAAGATCTGCCATTTCGTTGATCATCTTCTCACCAGACTATGCCTCTTCTCACTGGTGTCTAAAAGAAATTGCCAAAATTATTGAATGCCAAGAGAAATATGGACGCACTGTAATTCCTGTTTTCTACAAAGTGACACCCACAGATGTACGACATCAATCTGGGAGGTACCAAAAAGCATTTGCTGAGCATGCAACAAAACATGAGACCGAGCTACAACTCTGGAAACGTGCTTTAGATAAATCTGCTAGTTTCTCTGGAATGGAATCTACAAAGTATCAATTGGATAAATCAGTGAAGGTGGGTGATCTAAAATCTTTGTTGAAAGACAATGAAAATGATAATTCAGTGGCTTTTGAGTTAAAAAGGCTGGAAGACAAAGCTCTTATAACTATCTCTAAGGATAACATTGTATGTATGCATGATAGTTTACAAGAAATGGGTTGGGAGATTGTTCGGCAAGAGTCCATTGATGATCCTGGAAGCCGCAGTCGATTGTGGGATCCCAATGACATTTATGAAGCATTGCTTAGTAAGGCCATTAGAAGCATTCAACTTCCATTGACACCAATTAAGAAGCAAAAGTTAAGCGCTCATCAAATATTTGCTATGTTGAGAAGAGCAAAATTTGTTGAAATTTTTGGGACAAGGGCAAATTTACCAACAAGTGAACGAAGATTTCGTGCCGACGGAGTTAAATTTATGGGAACTGAACTAAGATTTCTTTTTTGGGAGAATTACCCTTTAAGGTCCTTGCCAGAGAGTTTAAATGCTGAAAAACTTGTTATATTGATTATGAATGAAGGTAAATTGGAAAACCTCTGGGATGGAGTGAAGAATGTGGTGAATTTAAAAAAGCTTGACCTCAGTTGGTCTAGAATGTTGAAGGAGCTTCCAGATTTATCAAGAGCTAAAAATCTTGAAGAACTGAACGTCCGTGGTTGTGTTATGTTGGCCTGCGTGCATTCATCTATTTTCTCTCTGCGGAAACTTGAGAGGTTGGACCTTGCTAACTGCACATCCCTTACTGTACTTGCAAGCAATTCCCATTTACTCAGTCTTCGTTATCTAAATCTTATATGTTGCGATAATCTTAAGAAATTCTCAGTGATTTCTGAGAATTTGAAAGAACTCAACTTTGGAGGAACAAAATTAAAAGCATTGCCCTCATCATTTGGAGATCAACCGAAGCTTGAATCGTTGTGTATTAGCGAAACTGGGATTGAGAGGTTGCCGTCATTAAACAATCTTGGTCAATTGTTAAAGGAAAACAAGAAACTTGTTCTGTTCTCAGATTCTGTGATGTTGGATGAACGTGCTATTGGGTTCAATGCGAAAATCAACATAATGAAATTTGCAAACCAGCACCTATCAGCACCAAATCACAATCCTGTTAAAAATTACGGATATCGAGATGCTTATACTCGTTCTGATCGATGTGTTTATATGTATCCTGGAAACAGTTTTCCAGAGTGGTTGGAGTATAGCACAGGAAAGGATTGTATTACTATTGATCTCTCTTCTGCTCCACCGTCCCCCGAGCTGGGTTTCATTTTCTCCTTCATTCTTGATATGAGCTCAATCACTACAAATCTTCAATATCCTATGATTAATAATCTTCAATGTCGTATCACTACATTTGATGGTGAAGATGGAGGTAAAAGTGACAGCTTCAGAATGCCCATACCTTATGGAAACCTCTATGTTGGATCGAATTACGTGTGTATGATCATATACGACCAAACGTGCTCTGAGTTCTTAAATACAAGAGCCAAAAATCAAACGAAGTTCAAAATCCAAGTTACAATGGTGCACCCTTCTAAAAATCCTCATACAACAATATTAATACAGCAGATGTTAAAAAGATTCGGAGTCAGCCCAATAAGCACCTCCGCATATGAGGCATTCATTGGACAAATTGAATTGGGTGACTCAAAGTCTGAATTTCATTAA 2136 0.383 MSDNNNPQIKYDVFVSFRGKDIRDGFLSHLTRAFHTKQINAFVDDKLEKGEEIWPSLVAAIERSAISLIIFSPDYASSHWCLKEIAKIIECQEKYGRTVIPVFYKVTPTDVRHQSGRYQKAFAEHATKHETELQLWKRALDKSASFSGMESTKYQLDKSVKVGDLKSLLKDNENDNSVAFELKRLEDKALITISKDNIVCMHDSLQEMGWEIVRQESIDDPGSRSRLWDPNDIYEALLSKAIRSIQLPLTPIKKQKLSAHQIFAMLRRAKFVEIFGTRANLPTSERRFRADGVKFMGTELRFLFWENYPLRSLPESLNAEKLVILIMNEGKLENLWDGVKNVVNLKKLDLSWSRMLKELPDLSRAKNLEELNVRGCVMLACVHSSIFSLRKLERLDLANCTSLTVLASNSHLLSLRYLNLICCDNLKKFSVISENLKELNFGGTKLKALPSSFGDQPKLESLCISETGIERLPSLNNLGQLLKENKKLVLFSDSVMLDERAIGFNAKINIMKFANQHLSAPNHNPVKNYGYRDAYTRSDRCVYMYPGNSFPEWLEYSTGKDCITIDLSSAPPSPELGFIFSFILDMSSITTNLQYPMINNLQCRITTFDGEDGGKSDSFRMPIPYGNLYVGSNYVCMIIYDQTCSEFLNTRAKNQTKFKIQVTMVHPSKNPHTTILIQQMLKRFGVSPISTSAYEAFIGQIELGDSKSEFH 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02942 711 Gene3D Ribonuclease Inhibitor 290 570 IPR032675 -
Spst9g02942 711 SMART till_3 10 146 IPR000157 GO:0007165
Spst9g02942 711 Pfam TIR domain 10 153 IPR000157 GO:0007165
Spst9g02942 711 FunFam Disease resistance protein (TIR-NBS-LRR class) 7 170 - -
Spst9g02942 711 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 148 IPR035897 -
Spst9g02942 711 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 179 441 IPR044974 GO:0006952
Spst9g02942 711 SUPERFAMILY L domain-like 296 474 - -
Spst9g02942 711 Gene3D - 5 173 IPR035897 -
Spst9g02942 711 ProSiteProfiles TIR domain profile. 9 156 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02942 Spst-Chr9 63520199 63524134 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02942 325 475 WRKY Transcription Factor Family AT4G12020 30.128 7.24e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02942 - - vun:114163400 482.256