Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02896 ATGGAGGAACAGTTAGCAATACAAGAAGCTGCTTCTGCTGGTTTCAAAAGCATGGACCATCTCATTCGACTCCTTTCTCCCTCTGCTTCCAATTCTTCTTCTTCTTCTAACAACAACAACGTTAAACTCAACAACCTCGACTGCTCCCAAATCACCGACTTCACTGTCTCCAAATTCAAACAGGTCATCAACCTCCTCAACCGCACCGGCCACGCCCGCTTCCGCCGCGCACCACCCCAAGCCCAAACCCAGGCCCTGACCCAACCACAACCCCAAACCCAACAAGGCTTTACTTTAGATTTCGTTAAACCCACTGTTCTTAACTCTAAGCCCTGCATCAAAGACGAAACCCTCACTCTCTCCACCACCACCACCACCTCCTCCTCCTTTTTGTCCTCCATCTCCAACGACGCCAGCGTCTCCGACGGCAAGATCGGCCCTTTCCTCCCTCCCTCCGCCGCCAAACCCCCTCTCTCCTCCTCTCACCGGAAAAAGTGCCGCGAAGCTGCCCTTTCCGCTAAATCCTCCTGCCACTGCTCCAAGAAAAGGAAATCGCGCATGAAACGGACGATCCGCGTCCCGGCGATAAGTTCCAAGATCGCCGACATCCCGCCGGACGAGTTCTCGTGGAGAAAATACGGACAAAAACCGATCAAGGGTTCACCTTATCCTCGTGGGTACTATAAGTGCAGCACCTTGAGAGGGTGTCCGGCGAGGAAGCACGTGGAGCGCGCGCAAGATGACCCGAAGATGCTGATAGTGACGTACGAGGGAGAGCACCGTCACGCGCTGCCGTTACCTGCCGCTACCGGCGGTGGTTTCGGCCTTTGA 831 0.5499 MEEQLAIQEAASAGFKSMDHLIRLLSPSASNSSSSSNNNNVKLNNLDCSQITDFTVSKFKQVINLLNRTGHARFRRAPPQAQTQALTQPQPQTQQGFTLDFVKPTVLNSKPCIKDETLTLSTTTTTSSSFLSSISNDASVSDGKIGPFLPPSAAKPPLSSSHRKKCREAALSAKSSCHCSKKRKSRMKRTIRVPAISSKIADIPPDEFSWRKYGQKPIKGSPYPRGYYKCSTLRGCPARKHVERAQDDPKMLIVTYEGEHRHALPLPAATGGGFGL 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02896 276 Gene3D WRKY domain 189 266 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst9g02896 276 SUPERFAMILY WRKY DNA-binding domain 202 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst9g02896 276 ProSiteProfiles WRKY domain profile. 199 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g02896 276 FunFam WRKY transcription factor 65 188 265 - -
Spst9g02896 276 Pfam Plant zinc cluster domain 163 202 IPR018872 -
Spst9g02896 276 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 4 265 IPR044810 GO:0003700
Spst9g02896 276 SMART WRKY_cls 204 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g02896 276 Pfam WRKY DNA -binding domain 206 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02896 Spst-Chr9 63043994 63045212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02896 1 262 WRKY Transcription Factor Family AT2G24570 52.961 6.26e-93 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst9g02896 WRKY 4.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02896 - - gmx:100127391 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02896 9 63043994 63045212 Spst9g02896 9 63043994 63045212 ECH
Spst3g03436 3 84124964 84126199 Spst9g02896 9 63043994 63045212 PCT