Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02886 ATGACAGATACAATTAAAGAGCAGCAAGTGATTGAGAAACACAATGAATCAGCAGACTTGATGAAGATGATATTTTCATCTAATCAACAGTCAGGGTCCATGGAGTTCTTTAGTGGGAACCTTAGAACAATAAGTTGCTTTGACTACCAGATATTGAAGAAAGCAACCAAGAATTTTCATGTTGATAATCTTCTTGGAAGTGGTGGATTTGGACCTGTTTACCAGGGAAAGTTAGCAGATGGAAAAATGGTTGCGGTTAAACAATTGTCTCTCAACAAATCCCAACAGGGAGAAAAAGAATTTCTGGTAGAGGTGACAACTATCACTAGTATCCAACACAAAAATCTGGTTCGTCTTCTTGGATGCTGCATAGATGGGCCACAAAGGATACTTGTCTACGAATACATGAAAAACAGAAGTTTGGACCTCTTTATACATGGAAACAGTGATCAATTTCTGGATTGGAGAACTAGATTTCAAATTATTCTGGGAATAGCGCGAGGACTACAATACCTTCATGAGGATTCACACCAAAGAATTGTTCACCGTGACATCAAAGCAAGCAACATTCTTCTTGATGACAAGTTTCAGCCAAAGATTGGAGACTTTGGTCTAGCTAGATTTTTTCCTGAAGATCAAGCTTATCTTAGCACACAGTTTGCTGGAACACTAGGTTATACTGCTCCAGAATATGCCATTAGAGGGGAATTATCAGAAAAGGCAGATATCTATAGTTTTGGAGTTCTCTTGCTTGAAATAATCTGTTGCAGGAAGAACACAGAGCACACTTTGCCATCAGAAATGCAGTACCTCCCTGAATATGCATGGAAAGTGTATGAAAATGCAAGGATATTGGACATTGTAGATCCAAGGCTGCAACAACATGGGTTCGTGGAAAAGGATGTTATGCAAGCAATCCACGTGGCTTTCTTGTGTCTTCAGCCTCATGCACATTTGAGGCCTCCAATGTCAGAGATTGTAGCATTGTTGACCTTCAAAATTGAGATGGTGACAACACCAATGAGGCCAGCCTTCCTGGACCGAAGACCAAGAAAGGACGAAGAAAAAGATTGTTCCCGAGCATTATCCCAGACTTTCACATCTCCCATATGTGATCACTGA 1122 0.4029 MTDTIKEQQVIEKHNESADLMKMIFSSNQQSGSMEFFSGNLRTISCFDYQILKKATKNFHVDNLLGSGGFGPVYQGKLADGKMVAVKQLSLNKSQQGEKEFLVEVTTITSIQHKNLVRLLGCCIDGPQRILVYEYMKNRSLDLFIHGNSDQFLDWRTRFQIILGIARGLQYLHEDSHQRIVHRDIKASNILLDDKFQPKIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLLLEIICCRKNTEHTLPSEMQYLPEYAWKVYENARILDIVDPRLQQHGFVEKDVMQAIHVAFLCLQPHAHLRPPMSEIVALLTFKIEMVTTPMRPAFLDRRPRKDEEKDCSRALSQTFTSPICDH 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02886 373 SMART serkin_6 59 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02886 373 Pfam Protein tyrosine and serine/threonine kinase 60 329 IPR001245 GO:0004672|GO:0006468
Spst9g02886 373 Gene3D Transferase(Phosphotransferase) domain 1 136 339 - -
Spst9g02886 373 CDD STKc_IRAK 65 331 - -
Spst9g02886 373 Gene3D Phosphorylase Kinase; domain 1 28 135 - -
Spst9g02886 373 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 136 340 - -
Spst9g02886 373 FunFam Cysteine-rich receptor-like protein kinase 10 23 135 - -
Spst9g02886 373 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 41 358 - -
Spst9g02886 373 ProSiteProfiles Protein kinase domain profile. 59 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02886 373 SUPERFAMILY Protein kinase-like (PK-like) 37 333 IPR011009 -
Spst9g02886 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02886 Spst-Chr9 62994758 62997874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02886 47 346 Receptor kinase-like Gene Family AT1G56120 48.667 8.22e-101 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst9g02886 PK_Tyr_Ser-Thr 5.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02886 - - gmx:100799624 674.085