Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02861 ATGAACTTCAGAAGTGGGTTCTCCGATTCGAACGATGACAGCAACAGCAATGGCGAGGACAATTCGCTTGCTTCAGAAGTCACGCCGCTGAGGCTTCTCTCGGAGCATCTGGGGTCAATCCTGGAGAGCGGGGTTGACTTTTTCTCTGACGCCATGATCGTGGCCGGCGACGGCCGGGAAGTGGCCGTGCACCGGTGCATTCTGGCGGCGAGGAGTGTCTTCTTCAAGAACAAGTTCGCCGGAGGCGTGGTGCTCCGCTTGAAGGAAGTGGCCAAGGACTACGATGTTGGGTTGGAAGCACTTGGAATAGTTCTGGCTTATTTGTACAGTGGGAGGGTGAAAGCTTTGCCCCATGGTGGTTTTTGTGAGTGTGTGGATGATGTTTGTTCCCATTTTGGGTGTAGACCTGTTGTGGATTTCTTGCTTCAGCTCCTCTATGTTTCATCCACTTTTCAACTTTCTGAGTTGGTTGCTCTTTATCACGTATAG 489 0.5174 MNFRSGFSDSNDDSNSNGEDNSLASEVTPLRLLSEHLGSILESGVDFFSDAMIVAGDGREVAVHRCILAARSVFFKNKFAGGVVLRLKEVAKDYDVGLEALGIVLAYLYSGRVKALPHGGFCECVDDVCSHFGCRPVVDFLLQLLYVSSTFQLSELVALYHV 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02861 162 Gene3D Potassium Channel Kv1.1; Chain A 20 162 IPR011333 -
Spst9g02861 162 MobiDBLite consensus disorder prediction 1 22 - -
Spst9g02861 162 SUPERFAMILY POZ domain 33 158 IPR011333 -
Spst9g02861 162 ProSiteProfiles BTB domain profile. 49 117 IPR000210 GO:0005515
Spst9g02861 162 Pfam BTB/POZ domain 47 114 IPR000210 GO:0005515
Spst9g02861 162 PANTHER REGULATORY PROTEIN NPR3 7 161 IPR044292 GO:0009862|GO:2000022|GO:2000031
Spst9g02861 162 SMART BTB_4 49 149 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02861 Spst-Chr9 62795679 62796167 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Spst9g02861 BTB 1.9e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02861 K14508 - gmx:100800032 217.238