Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02857 ATGGAGCCTCGCGTTGGAAATAAGTTTCGGCTTGGTCGTAAGATCGGTAGCGGATCGTTTGGAGAGATCTATTTAGGTACTAACATTCAAAATAATGAAGAGGTTGCAGTTAAGCTTGGGGTTTCGTTTAATCAGTTTCTGCAAGGGGTTGTGAAAATTTGGGTTCAGATTGGATTTTGTCGTGGCGTTCTTAATGTCATTGATCGGTTTGTGTGCACTTCTATTCTGGGTGAAAATGTCAAGACAAAGCATCCTCAATTGCTATATGAGTCCAAGTTGTACAGAGTTCTCCAAGGAGGAACTGGAATTCCAGATGTTAAATGGTTTGGAGTGGAGGGAGATTACAATGTTCTAGTGATGGATCTGCTTGGACCTAGTCTTGAAGATCTATTTAACTTCTGCAGTAGAAAGCTCTCACTAAAGACAGTTCTCATGCTCGCTGATCAAATGATCAATCGCGTGGAGTTTGTTCATTGTAAATCTTTTCTACACCGGGATATCAAACCAGATAATTTCCTCATGGGCTTGGGAAGGAGGGCAAACCAGGTGGCTGATCATTTACTTGCATTGTGTCGAGGTTATCCATCAGAATTTGCATCATACTTCCATTACTGCCGCTCATTAAGATTTGATGATAGGCCAGATTATGCTTACCTCAAGAGGATATTTCGTGACCTATTTATTCGGGAAGGATTCCAGTTTGATTATGTGTTTGATTGGACAATCTTGAAGTATCAGCAATCACAGCTAGCCGCTCCTCCTGCACGCACTGTTGGTCCTACTGCTGGAACCAGTTCTGCAATGCCCCCAGCTATGACTAATGCCGGTAGACAGACAGGAGAGGAAGAAGGACGACATCCTGTTCCGGTTTCAGGGGATTCCACACGGAGAAGAATGTCGGGGACCATCCCAAACTCTGTAAATATTTCAAAGCAGAAAAATCCAGTCACCATGGATAAGGAAGCCATGTTATCAAGGCCCAATGTCATGGGTCAGTCAAGTGGATCAAGGCGAGCTGCAGTTTCTAGTAGCCGCGATGCATTTGCTGGTAGTGAATTGGATCATCGTAGTCGTACTGCTGAGGCTAACCCTGGAACAGTGCGCAAAATATCATCTGGGAGAAATGCTTCTCATGTCAAAAACTATGAAAGTGCAGTCAAGGGCATTGAAGGTTTGCATTTGGAAAATGATGAGAGGGCACATTATTAA 1209 0.4359 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQNNEEVAVKLGVSFNQFLQGVVKIWVQIGFCRGVLNVIDRFVCTSILGENVKTKHPQLLYESKLYRVLQGGTGIPDVKWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHCKSFLHRDIKPDNFLMGLGRRANQVADHLLALCRGYPSEFASYFHYCRSLRFDDRPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLAAPPARTVGPTAGTSSAMPPAMTNAGRQTGEEEGRHPVPVSGDSTRRRMSGTIPNSVNISKQKNPVTMDKEAMLSRPNVMGQSSGSRRAAVSSSRDAFAGSELDHRSRTAEANPGTVRKISSGRNASHVKNYESAVKGIEGLHLENDERAHY 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02857 402 MobiDBLite consensus disorder prediction 254 273 - -
Spst9g02857 402 SMART serkin_6 9 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02857 402 Pfam Protein kinase domain 80 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02857 402 Gene3D Transferase(Phosphotransferase) domain 1 183 259 - -
Spst9g02857 402 Gene3D Transferase(Phosphotransferase) domain 1 124 182 - -
Spst9g02857 402 SUPERFAMILY Protein kinase-like (PK-like) 5 240 IPR011009 -
Spst9g02857 402 ProSiteProfiles Protein kinase domain profile. 9 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02857 402 MobiDBLite consensus disorder prediction 254 310 - -
Spst9g02857 402 MobiDBLite consensus disorder prediction 295 310 - -
Spst9g02857 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Spst9g02857 402 PANTHER CASEIN KINASE-RELATED 189 338 - -
Spst9g02857 402 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Spst9g02857 402 Gene3D Phosphorylase Kinase; domain 1 2 123 - -
Spst9g02857 402 MobiDBLite consensus disorder prediction 328 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02857 Spst-Chr9 62760162 62766391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02857 7 174 CBL-interacting serine-threonine protein kinases AT2G25090 27.976 4.16e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Spst9g02857 Pkinase 5.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02857 K02218 - gmx:100786777 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02857 9 62760162 62766391 Spst9g02857 9 62760162 62766391 ECH
Spst3g03395 3 83666920 83671975 Spst9g02857 9 62760162 62766391 PCT