Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02849 ATGGAGAATCACAAAGTGGTAGAATCTATGCATATCAAAGAGGATGTAGATAATACCGTGGCAGTGCAGGAAGAGGAGGATCAGGGAGATGTGGGGTCGAGAATAACGATGGAGAGGGTTGCTGCAGCTAAGAAATTCATTGAGGATCATTACAGGTCTCAGATGAAGCACATCCAAGAACGCAAGGAGAGGCGTTTAGAGCTCCAACAGAAGTTAGCATCCTCTCATGTACCAAAAGAGGAACAGATCAATCAATTGAAGGATTTAGAGAGCAAGGAAACTGAATTTATGCGGCTAAAAAGACATAAAATATGTGTTGATGATTTTGAGCTTCTAACCATTATTGGCAGGGGAGCCTTTGGGGAGGTTGAGCATGTTAGAGCTGAAAGGAATGTACTTGCAGAAGTTGCCAGTGACTGCATCGTGAAACTCTATTACTCTTTTCAAGATGATGAACACTTATATCTCATAATGGAGTACTTGCCTGGTGGTGATATAATGACTTTGTTGATGAGGGAAGAAACTTTGACTGAAACTGTGGCTAGATTTTACATTGCCCAAAGTGTTTTGGCCATAGAATCTATTCATAAACACAACTACATTCACCGGTTGGCATATTTACATCTTAATTATAATCTCGGTGTTATAAATCCTAATTTTCCATCTTACACTTTTTCATGTCCCCCCAGAGATATAAAACCGGACAACCTTCTATTGGACAAAAATGGTCACATGAAGCTATCTGATTTTGGTCTTTGCAAGCCACTTGACTGCTTAAGTCTATCATCTATTCATGAAATGGAAATACTCAATGATGGGAACTTATATGATACCATGGATGTTGATGGAGCCTTGCCAAATGGCAGAAATGGTAGGCGCTGGAAAAGTCCCCTTGAACAACTTCAACATTGGCAAATTAATAGGAGGAAGCTGGCATTTTCCACTGTTGGAACTCCCGACTATATTGCCCCTGAAGTGTTACTGAAAAAGGGTTACAGTGTGGAGTGTGACTGGTGGTCTCTTGGTGCTATAATGTATGAAATGCTAGTTGGATATCCTCCGTTTTACTCTGATGATCCTGTAACAACATGCAGAAAGGTGAGAAAACTGCGCACATATAAAGAGCATGTTTCTGCTATTGTGCACTGGAAAAATCACTTGAAATTTCCAGAGGAGGCCAGATTGACACCTGAAGCCAAGGATCTAATATGCAGGTTGCTTTGTGGCGTTTCACATAGGCTTGGCACTAGAGGAGCAGAAGAAATTAAAGCTCATCCGTGGTTCAAAGATGTCGCTTGGGACAGGCTCTATGAAATGGAGGCAGCATTTAAACCACAAGTCTTTGGAGAGCTTGACACTCAGAATTTTATGAAATTTGATGAAGTTGAACAGCCAAAAGCAACTAGAGCTGGATCTGGACCCATCAGAAAGAAACTCTTAACTTCTCAAGATCTCAGTTTTGTTGGTTATACATATAAGAATTTTGCTGCTGTCAAGGGGATGCGTCCATCTACTGGTGGGTATTTTTTGTCCTGA 1536 0.4095 MENHKVVESMHIKEDVDNTVAVQEEEDQGDVGSRITMERVAAAKKFIEDHYRSQMKHIQERKERRLELQQKLASSHVPKEEQINQLKDLESKETEFMRLKRHKICVDDFELLTIIGRGAFGEVEHVRAERNVLAEVASDCIVKLYYSFQDDEHLYLIMEYLPGGDIMTLLMREETLTETVARFYIAQSVLAIESIHKHNYIHRLAYLHLNYNLGVINPNFPSYTFSCPPRDIKPDNLLLDKNGHMKLSDFGLCKPLDCLSLSSIHEMEILNDGNLYDTMDVDGALPNGRNGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYSVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKVRKLRTYKEHVSAIVHWKNHLKFPEEARLTPEAKDLICRLLCGVSHRLGTRGAEEIKAHPWFKDVAWDRLYEMEAAFKPQVFGELDTQNFMKFDEVEQPKATRAGSGPIRKKLLTSQDLSFVGYTYKNFAAVKGMRPSTGGYFLS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02849 511 Gene3D Phosphorylase Kinase; domain 1 125 160 - -
Spst9g02849 511 CDD MobB_NDR_LATS-like 43 104 - -
Spst9g02849 511 Gene3D Phosphorylase Kinase; domain 1 47 124 - -
Spst9g02849 511 Gene3D Transferase(Phosphotransferase) domain 1 311 446 - -
Spst9g02849 511 SUPERFAMILY Protein kinase-like (PK-like) 99 442 IPR011009 -
Spst9g02849 511 FunFam Non-specific serine/threonine protein kinase 314 446 - -
Spst9g02849 511 SMART pkinase_C_6 429 494 IPR000961 GO:0004674|GO:0005524|GO:0006468
Spst9g02849 511 SMART serkin_6 109 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02849 511 ProSiteProfiles AGC-kinase C-terminal domain profile. 429 502 IPR000961 GO:0004674|GO:0005524|GO:0006468
Spst9g02849 511 PANTHER SERINE/THREONINE-PROTEIN KINASE 122 463 - -
Spst9g02849 511 Pfam Protein kinase domain 308 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02849 511 Pfam Protein kinase domain 124 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02849 511 Gene3D Transferase(Phosphotransferase) domain 1 161 255 - -
Spst9g02849 511 Gene3D Phosphorylase Kinase; domain 1 447 457 - -
Spst9g02849 511 ProSitePatterns Protein kinases ATP-binding region signature. 115 143 IPR017441 GO:0005524
Spst9g02849 511 ProSiteProfiles Protein kinase domain profile. 20 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02849 Spst-Chr9 62693684 62701672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02849 22 504 AGC Kinase Gene Family AT4G33080 65.825 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Spst9g02849 Pkinase 5.5e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02849 K08790 - gmx:100811359 791.571