Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02847 ATGGAGGAAATAACATCGACTGTTGCAGTGCCATTCACACTTGGGAATTTAATACAAAAAGATCCAGCAGTGACAACCCACATGGAGATAACTGGTCTAAAGCTCAGGGCAAATACTGCACCAGTTTTAATATTAAATTCTCAGATTGAAAGTGATAATCACACAGATATTGGTCCACAAACCCAAAATAAAGTGTCTTCAGAGGCAAAGGGGAATCAGATTGGAGCTGACCTTGTCTCAGAAATGGTTAGTCAAGGAGACAATAACCGTTTCCATGCTGAAAACCAAAACCAGGCATGGAAAGAAAATGAATCATTGTTAGCTAAGGATTTTCAGTGTGAGCATATCTCGCAATCTGCGACTGGTGACAAAAATAGCCTTTGTAGGGAGGAATCTTCTGTTTTTAGGACTAATTGTTGTGAAATAAGCTCACCTATCACTATCAAGGTTGATGATAACACAATTCATGGAAGGTTCGGTTCGACCGAGCCGCCACGTGCAGCTACAGAGCCTGTGCAGAACATGATTTCTGTTGCTAGAGGACATGAGAGTGAAGAAGGAAGTGGATCAGATGAGTCTGATAAAAAACCATGTGCTGTGGTTCATGAGATGCCAGAGAAGTCAACATGCTTGGAAATTAGTGATGCCACCAGTACTACCCCACTTTGGGGTTGCTCATCAGTTTGTGGAAGGAGAGAGGAGATGGAAGATGCTATTTCTGTTAGGCCTCACCTTTTTCAATTCAGTTCAATGATGGTAATGGATGACTATGTGAGTGAAAACTCAAAATCTTCACCAGCCCACTTTTTTGGTGTCTATGATGGACATGGGGGCTGTCAGGTTGCTAATTACTGCGGGGAACATCTTCATTCAGTGTTGGTTGATGAGATAAAAGCTGCACAATCAAGCTTGGATGAACAGAATGGGAAGGAAAACTGGGAGGATCAATGGAAGAAGGCATTCTCCAATTGTTTTCACAAAGTAGATGATGAGGTTGGAGGGGTTGGTGAAGGTAATGGAGAAACTGTTGAACCTCTTGCTCCTGAGGCTGTTGGCTCCACTGCTGTGGTTTCCCTTTTGACTCAAACTCACATAATAGTTGCAAATTGTGGAGATTCAAGAGCTGTTTTGTGTCGTGGAAAAGAAGCAATGCCATTGTCTGATGATCACAAACCAAATAGAGAAGATGAATGGGAAAGGATAGAAGCTGCAGGAGGAAGGGTTATACAGTGGAATGGGTACCGAGTTCTAGGTGTTTTGGCAGTGTCAAGGTCCATAGGTGATAGGTACTTGAAACCGTGGATAATTCCAGAGCCAGAAGTGAAGTGTGTTCAAATAGACAAAAACGACGAGTGCCTCATTCTGGCCAGTGATGGATTGTGGGATGTCATGACAAATGAAGAAGCCTGTGACTTTGCAAGAAGGAGAATCCTTCTTTGGCATAAGAAGAATGGCAACAACTCATCGTCACAAGAAGACCAAGGACCTGACCCTGCAGCTCAGTATGCTGCAGAGTATCTATCTAGACTTGCCCTCCAAAGAGGAAGCAAAGATAACATCTCTGTCATTGTTATAGACTTGAAGCCCCAAAGAAAATTCAAGAAAAAAGAATAA 1614 0.4263 MEEITSTVAVPFTLGNLIQKDPAVTTHMEITGLKLRANTAPVLILNSQIESDNHTDIGPQTQNKVSSEAKGNQIGADLVSEMVSQGDNNRFHAENQNQAWKENESLLAKDFQCEHISQSATGDKNSLCREESSVFRTNCCEISSPITIKVDDNTIHGRFGSTEPPRAATEPVQNMISVARGHESEEGSGSDESDKKPCAVVHEMPEKSTCLEISDATSTTPLWGCSSVCGRREEMEDAISVRPHLFQFSSMMVMDDYVSENSKSSPAHFFGVYDGHGGCQVANYCGEHLHSVLVDEIKAAQSSLDEQNGKENWEDQWKKAFSNCFHKVDDEVGGVGEGNGETVEPLAPEAVGSTAVVSLLTQTHIIVANCGDSRAVLCRGKEAMPLSDDHKPNREDEWERIEAAGGRVIQWNGYRVLGVLAVSRSIGDRYLKPWIIPEPEVKCVQIDKNDECLILASDGLWDVMTNEEACDFARRRILLWHKKNGNNSSSQEDQGPDPAAQYAAEYLSRLALQRGSKDNISVIVIDLKPQRKFKKKE 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02847 537 ProSitePatterns PPM-type phosphatase domain signature. 269 277 IPR000222 GO:0043169
Spst9g02847 537 PANTHER PROTEIN PHOSPHATASE 184 527 IPR015655 GO:0004722|GO:0006470
Spst9g02847 537 ProSiteProfiles PPM-type phosphatase domain profile. 222 527 IPR001932 -
Spst9g02847 537 SMART PP2C_SIG_2 253 527 IPR001932 -
Spst9g02847 537 SUPERFAMILY PP2C-like 221 529 IPR036457 -
Spst9g02847 537 Gene3D - 213 537 IPR036457 -
Spst9g02847 537 FunFam Protein phosphatase 2C 16 213 537 - -
Spst9g02847 537 CDD PP2Cc 224 527 IPR001932 -
Spst9g02847 537 SMART PP2C_4 212 525 IPR001932 -
Spst9g02847 537 Pfam Protein phosphatase 2C 226 520 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02847 Spst-Chr9 62651825 62654669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02847 221 536 PP2C-type Phosphatase Gene Family AT1G17550 58.951 2.71e-134 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02847 K14497 - gmx:100812974 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03385 3 83529117 83531573 Spst9g02847 9 62651825 62654669 PCT