Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02835 ATGGGTCGGTCGGAATTTTCGAAGCCAAAGTCTAGAATGGTGGAACCTCCGCGTCCAAAAGACGCAAACTTTGTTGAAGAAAAGGCTCAAATGTCAAGTTCACCTGCAAGGAATTCTCCCAACAAGAATGTTGCTGACGCAACTATTGTCACTCGAAGAAGCTCCTTGCTTGGGACTCCAGGAGAAGAAGAAGATGATGATGATGATGAAGAACTGTACAAGACTGCAAATATTGAAGTGATCAAGAGATCTGGTAAGAAATGGAGAGTTGTTGAGTTGTTTGCTTTTGCTTGTATCGTGGGGATTTTGATTGCAAGCTTGACTGTGAATGAGTTGCAAAGGAGGTTGATTTGGGGATTGGAACTGTGGAAATGGTGTGTATTGGTTTTGGTTATCCTCTGTGGTAGATTGGTCACTGAGTGGTTTATCAATGTTTTGGTTTTCTTGATTGAGAGGAACTTTTTATTTAGGAAGAAGGTTTTGTATTTTGTTTATGGTGTGAAGAAGAGTGTTCAGGCCTTTATATGGTTAGGTTTGGTTCTTGTAACATGGGGTCTGCTTTTCAACCATGGAGTGAAGAGAACCGGAAAGGTTACTAGGATTCTTAATTACATTACTAGGGCCCTTGCTTCTTGCCTTATTGGAGCAGCTATATGGCTAGCCAAAACATTGTTGATAAAACTTTTAGCTTCAAAATTTCAATCTACTAGATTTTTTGACAGGGTGCAACAATCAATCTTTCATCAATACATTCTTAAGACTCTGTCAGGTCCTCCCATGATGGAGGTGGCTGAAAATGTAGGTAGGACTTCAAAGAGTGGCCACCTCAGTTTTAAGACCATGAACAATGAGAATGAACTGGAGAAAAAACCAGTCATTGATGTAGACAAGCTAAAGAAAATGAAACAAGAGAAAGTTTCTGCCTGGACTATGAAAGGGTTGATTAATGTGATAAGAAGTTCTGGGTTGTCTACCATCTCCTATACACCAGATGCAGATGAGAGTGACCAGAAAAATAATGAAATTACGAGTGAGTGGGAAGCAAAGGCAGCTGCATATAGAATTTTTGAGAATGTAGCCAAGCCCGGACACAAGTATATTGAGAAGGATGACCTCTTGCGATTCATGAAAATTGAAGAAGTGGAAAATGTTCTTCCACTGTTTGAAGGGGCAGTTGAGACTGGAAGAATTAAGAGGAAGTCTTTGAAGAACTGGCTGGTAAAAGTCTACCTTGAACGCCGATCGCTCATACATTCGCTGAATGACACCAACACAGCTGTGGATGACTTGAATATGCTTGCTTCTCTGATTGTCCTTATTGTGATGGTTATTCTATGGCTTCTTATAATGGGGTTCTTAACAACTGAAGTTCTTGTCTTTATTTCTTCCCAGCTTTTACTTGTGGTTTTCATGTTTGGCAACACAGCTAAGACTGTATTTGAAGCTATTATATTTGTTTTTGTGGTGCACCCATTTGATGTTGGTGATCGTTGTGTCATTGATGGAGTTCAGATGACTGTGGAAGAGATGAGCATTCTAACTACCGTCTTTTTGAGGTATGACAATGAAAAGATTTTCTATCCAAACTCAGTTCTTGCAACAAAGCCAATCAGTAACTTCTACAGGAGTCCAGAAATGAGTGATCGTGTTGAATTTGCTGTTGATTTTTCTACTGCTATTGAAAGTGTTGGAACTTTAAAGGCAAAGTTAAAAGCATATTTGGAGAGTAGACCCCAACACTGGCGTCCCAACCACAGTGTATTGGTTACGGATATTGAGAATGTAAATAAGATGAAAATGGCTGTGTGTGTTACTCACACCATAAATTTTCAGAACTATGGGGATAAAAACAGCAGAAGATCTGAATTAGTCTTGGAGTTAAAGAAAATTCTTGAAGACCTTAACATTAAATATCATCTGCTGCCACAAGAAGTTCATCTCAGTTATGTAAGGAAAGCTCCCACGTCAGACACTCGCAAATATGCCCAAAATTTCCACCTCTCATTCCACTTCTGCCTCCACCACCATTTCTCTCAAACCACGTTAACATATAATCAACAATCTTCACAGAAACTTAACCAACAAGTAGCAGGGGAAGCAAGAAAGAAGTGCAGAAAAGACATGGCTTCCACTTCTGCAGTTTCAATGGCTATGCCTGCAATTTGTGCCAGCCACAAGAGGGTGGTGGTTCCTAGCTCTGATGCATTCTTCAAGCCACTGCCTCTACGGTCTTCAAAGGCAGTGACGGCATCAAATCCCAATGGAAGGTTTCAAGTGAGAGCCTCCATGAAGGAGAAAGTTGTGACAGGGCTCACAGCAGCTGCATTGACGGCTTCAATGATGGTTCCTGATGTGGCCGAGGCTGCTGTCACACCTTCTCTCAAGAACTTCTTGCTCAGCATCATCGCCGGCGGAGTGGTTGTTGCGGTCATTGTTGGTGCTGTAATTGGTGTTTCCAATTTCGATCCCGTCAAACGAAGCTGA 2484 0.4122 MGRSEFSKPKSRMVEPPRPKDANFVEEKAQMSSSPARNSPNKNVADATIVTRRSSLLGTPGEEEDDDDDEELYKTANIEVIKRSGKKWRVVELFAFACIVGILIASLTVNELQRRLIWGLELWKWCVLVLVILCGRLVTEWFINVLVFLIERNFLFRKKVLYFVYGVKKSVQAFIWLGLVLVTWGLLFNHGVKRTGKVTRILNYITRALASCLIGAAIWLAKTLLIKLLASKFQSTRFFDRVQQSIFHQYILKTLSGPPMMEVAENVGRTSKSGHLSFKTMNNENELEKKPVIDVDKLKKMKQEKVSAWTMKGLINVIRSSGLSTISYTPDADESDQKNNEITSEWEAKAAAYRIFENVAKPGHKYIEKDDLLRFMKIEEVENVLPLFEGAVETGRIKRKSLKNWLVKVYLERRSLIHSLNDTNTAVDDLNMLASLIVLIVMVILWLLIMGFLTTEVLVFISSQLLLVVFMFGNTAKTVFEAIIFVFVVHPFDVGDRCVIDGVQMTVEEMSILTTVFLRYDNEKIFYPNSVLATKPISNFYRSPEMSDRVEFAVDFSTAIESVGTLKAKLKAYLESRPQHWRPNHSVLVTDIENVNKMKMAVCVTHTINFQNYGDKNSRRSELVLELKKILEDLNIKYHLLPQEVHLSYVRKAPTSDTRKYAQNFHLSFHFCLHHHFSQTTLTYNQQSSQKLNQQVAGEARKKCRKDMASTSAVSMAMPAICASHKRVVVPSSDAFFKPLPLRSSKAVTASNPNGRFQVRASMKEKVVTGLTAAALTASMMVPDVAEAAVTPSLKNFLLSIIAGGVVVAVIVGAVIGVSNFDPVKRS 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02835 827 MobiDBLite consensus disorder prediction 1 52 - -
Spst9g02835 827 FunFam Predicted mechanosensitive ion channel 491 540 - -
Spst9g02835 827 Pfam Mechanosensitive ion channel 433 637 IPR006685 GO:0016020|GO:0055085
Spst9g02835 827 MobiDBLite consensus disorder prediction 27 52 - -
Spst9g02835 827 Gene3D Single helix bin 789 827 - -
Spst9g02835 827 SUPERFAMILY Sm-like ribonucleoproteins 481 540 IPR010920 -
Spst9g02835 827 Gene3D - 491 540 IPR023408 -
Spst9g02835 827 MobiDBLite consensus disorder prediction 1 25 - -
Spst9g02835 827 Pfam Photosystem II reaction centre X protein (PsbX) 790 827 IPR009518 GO:0009523|GO:0015979|GO:0016020
Spst9g02835 827 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 5 655 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02835 Spst-Chr9 62567355 62572169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02835 2 648 Mechanosensitive Ion Channel Family AT5G12080 53.030 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02835 K22048 - gmx:100777332 1060.06