Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02817 ATGACCTTCATGAAAACCATGTGGAAGTCTATCTTCCCGGGTTGTTATAAGGGTGGATATCCCTCTCCGAAGCCAAAGAAAGTGGTGGCTACAAAGACAAACACTTCTCACAGGATTTCTGTGATGGATTTGAGTTATCCAAGCACGACTCTTTCTGAGGATCTCTCCATTTCTCTAGCGGGGACTAACCTCCATGTTTTCACACTTGCTGAGCTCAAGATTATCACGCAGTCTTTCTCTTCTAGCAACTTTCTAGGAGAAGGTGGGTTCGGACCAGTGCATAAAGGGTTCATTGATGACAAGCTTAGGCATGGCCTTAAGGCTCAACCCGTGGCTGTTAAGCTCTTGGACTTGGATGGCTCGCAGGGCCACAAAGAGTGGTTGACTGAAGTTGTTTTCCTGGGGCAACTAAGGCATCCACATCTGGTGAAGCTGATAGGATACTGTTGTGAAGAAGAACACAGACTTTTGGTATATGAATATTTACCAAGAGGAAGCTTGGAGAATCAGTTATTTAGAAGATTCTCAGCATCACTGCCATGGTCAACGAGAATGAAAATTGCTGTTGGGGCTGCCAAGGGTCTAGCCTTTCTTCATGAAGCCGAGAAGCCAGTCATCTATAGGGATTTCAAAGCTTCAAACATCTTGTTAGACTCAGATTACAATGCAAAGCTATCTGATTTTGGGTTGGCAAAAGACGGTCCCGAAGGAGATGACACCCACGTTTCAACCCGAGTTATGGGCACACACGGTTACGCAGCCCCAGAATATGTCATGACAGGTCACTTGACAGCAATGAGTGATGTGTATAGTTTTGGGGTAGTGCTTTTGGAGCTGCTAACAGGGAGACGATCAGTGGATAAGAATCGTCCTCCAAGGGAGCAGAATCTAGTGGAGTGGGCAAGGCCAATGTTGAATGATTCAAGGAAACTAAGTAGGATAATGGACCCTAGACTTGAAGGGCAATATTCTGAGATGGGGACCAAAAAAGCAGCAGCATTGGCTTATCAATGCCTCAGCCAAAGGCCTAGGAGCAGACCGTCAATGAGCACAGTGGTTAAGACCCTTGAGCCTCTCCAGGATTTTGATGACATTCCAATTGGAACATTTGTTTACACTGCTCCACCAGATCAAAACAATGAAGTGCATAACAGGGATGCAAGGGAGCAATTTGATGCACCTAGAAAGAGGGAAAATAGCAATGGCCAACACCTTCACAGGAACCACCATCTTAACAGGCATCATCCGCTGAAGTCCCCCAAGACCCCAAAGCCACAATCACACTCAAATTTACGCCCACTGAATGATCACAACAAACCTAGAAATGGTAGAGGAAGTGGATCAAACTCTCCTCCATCACACGTGAAAAGGCCAGGAATCATTGCCTAA 1389 0.4586 MTFMKTMWKSIFPGCYKGGYPSPKPKKVVATKTNTSHRISVMDLSYPSTTLSEDLSISLAGTNLHVFTLAELKIITQSFSSSNFLGEGGFGPVHKGFIDDKLRHGLKAQPVAVKLLDLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRFSASLPWSTRMKIAVGAAKGLAFLHEAEKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTHGYAAPEYVMTGHLTAMSDVYSFGVVLLELLTGRRSVDKNRPPREQNLVEWARPMLNDSRKLSRIMDPRLEGQYSEMGTKKAAALAYQCLSQRPRSRPSMSTVVKTLEPLQDFDDIPIGTFVYTAPPDQNNEVHNRDAREQFDAPRKRENSNGQHLHRNHHLNRHHPLKSPKTPKPQSHSNLRPLNDHNKPRNGRGSGSNSPPSHVKRPGIIA 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02817 462 Gene3D Transferase(Phosphotransferase) domain 1 162 366 - -
Spst9g02817 462 ProSiteProfiles Protein kinase domain profile. 79 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02817 462 CDD STKc_IRAK 85 359 - -
Spst9g02817 462 PANTHER OS01G0588500 PROTEIN-RELATED 45 360 - -
Spst9g02817 462 FunFam Serine/threonine-protein kinase BIK1 47 161 - -
Spst9g02817 462 Pfam Protein tyrosine and serine/threonine kinase 83 356 IPR001245 GO:0004672|GO:0006468
Spst9g02817 462 FunFam Probable serine/threonine-protein kinase PBL8 162 374 - -
Spst9g02817 462 MobiDBLite consensus disorder prediction 391 462 - -
Spst9g02817 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Spst9g02817 462 MobiDBLite consensus disorder prediction 391 405 - -
Spst9g02817 462 MobiDBLite consensus disorder prediction 406 421 - -
Spst9g02817 462 SUPERFAMILY Protein kinase-like (PK-like) 55 357 IPR011009 -
Spst9g02817 462 Gene3D Phosphorylase Kinase; domain 1 43 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02817 Spst-Chr9 62410352 62412741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02817 65 387 Glycoside Hydrolase AT3G07070 50.920 8.16e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst9g02817 PK_Tyr_Ser-Thr 9.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02817 - - gmx:100797003 804.283