Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02804 ATGTCCAGCTCGTCGGAGTACTCTGAATTTTCCGGCCAGAAACCGGCGAAGTCGCCGGAGAAGTCCAGCTTCTCTCAAACTTGTAGTTTGTTGAGTCAATATATCAAGGAGAAGGGTAGCTTTGGAGATCTCACCCTTGGTATGACATGCAGCACTGAACCATGTGGGTCACCTGAGACATCATGTCAATCTGCTACAACTATGAACTTGTTTCCTACCAAGGAAAACAACGTGACACCAAAGAACCTGACAACTATGGATTTGCTCTCTCCACAAGCTTCCTATCATCCTTCAGAGGAGATTCCATCCTTGGTTAATTCCAGTGCAATTAAGCCTTTGAGCAAGGGTGCTAAAACTGCCCAGATGACAATCTTTTATGGTGGACAAGTTGTTGTGTTTGATGATTTTCCTGCTGACAAAGCAAATGAGATCATGTCCTACGCTAGAGGGAAACCACAAAGCCAGAGCAATTCTGTTTTCACCTACACACAGAGCCAGCCTTCATTTCCTCCTAACTTGGTCAGAGCTTCTGCTGATTCAAGTGCTCCAATTATTCCCACTGTGAATATTACCAACTCCATCCATGAACACTCTCAAGCATCAGCCAGACCTATTGTTTGTGATCTGCCAATTGCTAGAAAAGCTTCACTCCACCGGTTTCTGGAGAAGAGAAAGGATAGAATTGCTTCCAAAGCTCCATATCCAGTAACTAATGGGCCTTCAAACAAGGCAGCAGAGTCCATGCCATGGCTTGGGCTGAGTGCTACATCACCTCAAATCTGA 783 0.4521 MSSSSEYSEFSGQKPAKSPEKSSFSQTCSLLSQYIKEKGSFGDLTLGMTCSTEPCGSPETSCQSATTMNLFPTKENNVTPKNLTTMDLLSPQASYHPSEEIPSLVNSSAIKPLSKGAKTAQMTIFYGGQVVVFDDFPADKANEIMSYARGKPQSQSNSVFTYTQSQPSFPPNLVRASADSSAPIIPTVNITNSIHEHSQASARPIVCDLPIARKASLHRFLEKRKDRIASKAPYPVTNGPSNKAAESMPWLGLSATSPQI 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02804 260 MobiDBLite consensus disorder prediction 231 260 - -
Spst9g02804 260 Pfam Jas motif 210 234 IPR018467 -
Spst9g02804 260 SMART tify_2 115 150 IPR010399 -
Spst9g02804 260 Pfam tify domain 118 148 IPR010399 -
Spst9g02804 260 ProSiteProfiles Tify domain profile. 115 150 IPR010399 -
Spst9g02804 260 MobiDBLite consensus disorder prediction 1 23 - -
Spst9g02804 260 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 16 243 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02804 Spst-Chr9 62275846 62277834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02804 1 255 Tify Gene Family AT1G19180 42.164 8.96e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Spst9g02804 tify 6.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02804 K13464 - gmx:100812618 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02804 9 62275846 62277834 Spst9g02804 9 62275846 62277834 ECH