Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02796 ATGAACGAACCAGAATGGGAACTCCTTCCCCCTAATCCAGGTTTTGAGGTTGGTGTCATCACGCAAACCATGTCCATGGCCCTGCAATTTCTTCTTCTGCTCCATTTGCTCGCTGTTGCTGCTCATGGACTCGCTTCCAATGCGGTGAGTGTGTTGCTTCATACACTGAACGAGACTTGTGGATACTTCGATGGTTCTCTCAGTAGAGACACAAAAGTACCTTGCCCAGTTGGTTGGGTTATGAACCCTAAGAAGACCAAGTGCTTTCTCCATATTGGGAGGCCTCAATCGTGGAATGACTCAGAGACCTGTTGTAGTAAGTATGGTGGACATTTAGCCTCATTGACATCACTTCAGGATCTACAATTTGCACAGAACCTATGTGGTGAATCTATGAATAGTTGCTGGATTGGTGGACAAAGACACAATTCTACAGCTGGTTATCAGTGGATGTGGTCTGACAATTCGCAAGGGAATAACTCCTTATTTCCAGTGGAAGATGTTCCATCCCATTGTAATGGAACTGGACTATCCTGTCATAGAAACAGTACAGACAATTTATGTACAGTATTCACTAATAATTCAAACTCTCTCATGAGTGAGAGATGTGACAATCCTCACTCTTCTCTATGTATACTGGATATAGATGCAGCATGTAACCGTATGCACTGCCATAGGGATTATTACCTTATCATCCTCATAGTGGTGAGTGCCTTGATTCTCTCTACAACATTAGCAGTGGTAGTTTGGCTTCTTGTATATAAACGGGGCAAGAAAAGAAGGCGGTCTAGAAAACTATCTATTCCAGGAGCTTCTCTTCCATCATGGAAAATCTTTACCAAAGAGGAACTAAGGTCAATTACAAAGAATTTCAGTGAAGGTAACCGTCTTCTTGGGGATACCAAGACTGGTGGTACATACAGTGGGGTTTTATCAGATGGTTCAAGGGTTGCAGTTAAGAGATTAAAGAGGACAAGCTTTCAGAGGAAAAAGGAGTTTTATTCAGAAATTAGCAGAGTTGCTAGGCTTCGATATCCAAATCTGGTGGCTGTGATGGGGTGCTGCTATGATCATGGTGACCGCTACATTGTTTATGAGTTTGTAGCTAATGGTCCCTTAGATAAATGGCTACATCACATACCTAGGGGAGGTCGCAGCTTAGATTGGGTTATGAGAATGAAAATTGCAACGACGCTCGCCCAAGGAATTGCGTTTCTACATGACAAGGTTAAGCCACAAGTGGTGCATCGAGATATACGTGCTAGTAATGTACTACTGGATGAGGAGTTTGGAGCACGCCTGATGGGTGTGGGTCTGTCCAAGTTTGTGCCGTACGAAGTAATGCATGAGAGGACTGTCATGGCAGGTGGAACTTATGGATATCTTGCTCCAGAGTTTGTGTATAGAAACGAGCTTACAACAAAGAGTGACGTATATAGTTTTGGTGTTCTACTACTTGAAATAGTAAGTGGACGTAGACCTGCACAGGCAGTTGATTCTGTGGGTTGGCAAAGTATATTTGAATGGGCAACACCTCTTGTGCAAGTGCATCGCTATCATGAACTCTTGGATCCTCATATAACTTCATCCTCTTCTAGCATCATCCCAGAGGCTAGTACCATCCAAAAGGTGGTTGACCTTGTTTATTCTTGCACGCAGCATGTTCCTTCTATGCGCCCTAGAATGTCTCATGTTGTTCACCAGCTGCAACAGATTGCCCAACCACCTGCAAAGTAA 1737 0.4358 MNEPEWELLPPNPGFEVGVITQTMSMALQFLLLLHLLAVAAHGLASNAVSVLLHTLNETCGYFDGSLSRDTKVPCPVGWVMNPKKTKCFLHIGRPQSWNDSETCCSKYGGHLASLTSLQDLQFAQNLCGESMNSCWIGGQRHNSTAGYQWMWSDNSQGNNSLFPVEDVPSHCNGTGLSCHRNSTDNLCTVFTNNSNSLMSERCDNPHSSLCILDIDAACNRMHCHRDYYLIILIVVSALILSTTLAVVVWLLVYKRGKKRRRSRKLSIPGASLPSWKIFTKEELRSITKNFSEGNRLLGDTKTGGTYSGVLSDGSRVAVKRLKRTSFQRKKEFYSEISRVARLRYPNLVAVMGCCYDHGDRYIVYEFVANGPLDKWLHHIPRGGRSLDWVMRMKIATTLAQGIAFLHDKVKPQVVHRDIRASNVLLDEEFGARLMGVGLSKFVPYEVMHERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVGWQSIFEWATPLVQVHRYHELLDPHITSSSSSIIPEASTIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQIAQPPAK 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02796 578 SUPERFAMILY C-type lectin-like 67 212 IPR016187 -
Spst9g02796 578 SMART tyrkin_6 295 569 IPR020635 GO:0004713|GO:0006468
Spst9g02796 578 SUPERFAMILY Protein kinase-like (PK-like) 265 570 IPR011009 -
Spst9g02796 578 ProSiteProfiles Protein kinase domain profile. 292 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02796 578 ProSiteProfiles C-type lectin domain profile. 84 212 IPR001304 -
Spst9g02796 578 SMART CLECT_2 75 212 IPR001304 -
Spst9g02796 578 FunFam C-type lectin receptor-like tyrosine-protein kinase 269 367 - -
Spst9g02796 578 Gene3D Transferase(Phosphotransferase) domain 1 368 577 - -
Spst9g02796 578 ProSitePatterns Tyrosine protein kinases specific active-site signature. 414 426 IPR008266 GO:0004672|GO:0006468
Spst9g02796 578 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 108 573 - -
Spst9g02796 578 Pfam Lectin C-type domain 95 211 IPR001304 -
Spst9g02796 578 Gene3D - 63 223 IPR016186 -
Spst9g02796 578 Pfam Protein tyrosine and serine/threonine kinase 297 569 IPR001245 GO:0004672|GO:0006468
Spst9g02796 578 Gene3D Phosphorylase Kinase; domain 1 270 367 - -
Spst9g02796 578 CDD CLECT 87 211 - -
Spst9g02796 578 FunFam C-type lectin receptor-like tyrosine-protein kinase At1g52310 368 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02796 Spst-Chr9 62154039 62158893 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02796 105 575 Receptor kinase-like Gene Family AT1G52310 69.792 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Spst9g02796 PK_Tyr_Ser-Thr 3.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02796 - - vra:106762676 1020.38