Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02791 ATGGATAGCGGTGGAGGCTACAAATTGAGTGGAATTAGGCAGATTGTGAGGCTAAAGGAAATGCTGCAGAAGTGGCAGAATGTGACTTTAGGCACAAAACATTCAATCCCCAGCATTACTGATCAAGAGCCTAAAGATGGGAACATGATGCCATTAATTAACAAAAGAGTAGTGAATGTTATGAATTGTGAATCTGACACAGAGGACAGTTGCCAAAGTCCTGAACCGCTTCCACCACCTGATGTTCCAAAGGGATACTTGGCAGTGTATGTTGGGCCTGAGCTTAGGAGGTTCATCATTCCCACCACCTACCTCAGCCACTCTCTCTTCAAAGTTTTGCTGGAAAAAGCTGCAGAGGAATTTGGGTTTGATCACAATGGTGGCCTCACCATCCCATGTGAGACTGAGACCTTCAAGTACCTACTCAAGTGCATAGAGAATGAGCAACTCAGTGATAGCACCCACATATCTGAAACTGCAGAAGCTGAAAGTTCGGGAACTGTGAAGCGTAAGTAG 516 0.4516 MDSGGGYKLSGIRQIVRLKEMLQKWQNVTLGTKHSIPSITDQEPKDGNMMPLINKRVVNVMNCESDTEDSCQSPEPLPPPDVPKGYLAVYVGPELRRFIIPTTYLSHSLFKVLLEKAAEEFGFDHNGGLTIPCETETFKYLLKCIENEQLSDSTHISETAEAESSGTVKRK 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02791 171 Pfam Auxin responsive protein 77 145 IPR003676 GO:0009733
Spst9g02791 171 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 65 141 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02791 Spst-Chr9 62088212 62089203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02791 1 154 Calmodulin-binding Proteins AT3G43120 64.935 3.56e-70 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02791 K14488 - gmx:100527570 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02791 9 62088212 62089203 Spst9g02791 9 62088212 62089203 ECH
Spst3g02794 3 77514916 77515853 Spst9g02791 9 62088212 62089203 PCT