Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02781 ATGCCGTTGGCATCGTCATCCCTATCTTATTGGTTTACTTCGACTGACCCAATTGGTGTTGTGGCGTGGAGAGTTTGGGACTGTGCCCGAGACACAGAAGTTCGGAATTTGACCAATTGGGTTGCTGATTTTCCCCTCAACTTGATCTGGGTCCTTCCCTTCTCTTCAATCTCAGAGTTGTATTGTTGTGCCCAATTCCTGCGGGACAAAGCTAAAACCTCGATTCCTATCTTCTTTCTGGGTTGGATTTGTCATCTTGTAGAATCGTTAGGAGGCATTGGGATGGGGAGAGTAGAAGCTATTGTAGTAGGTGTGTCAAGACATTGTAGTCTCCTTGCCGTCCTGAGTGGTAAATCACGTGACACCAAACAAAAGCAAAAGCAGAGTGCTGCTTCTGAGGATCAACCTCCTTACCCCTTTCCAGAGCTTTCTTCCTCTGGTAGTCTTGAGGTCAAGCTATTGATCAAACCTACTACCAATGAACTCAGCCGAGCTCTTGAACAACTGCAGCCAGAATTTGTTTACCTTCAAGGTCACTGGCTAGAAGATAGGGGAGAAATTGGGCCCCTTGTATGGGAGGATTTTGACCTGTCTGCCCCAGAAGCACTGTGTGGATTGTTTTGTTCCAAATTACCTAATACCGTTTATCTGGAAACTCCTAAGGGAGAAAAATTGGCAGAGGCACTCCGTAATAAGGGAGTTCCATACACTATCTATTGGAAAAATGATTTTTCGAAGTATGCAGCTTCACATTTTCGTCATTCTTTTTTCTCTGTGGCACAGAGTACATCCAGCCATACATGGGATGCTTTTCAGCTTGCTCTGGCATCTTTTAGACTATACTGTATACAAAACAATGTCTTACCTTCTAACAGCCAGAAAGGTGTTGGTAAGTTTGGTCCACAAATTCTCGGGGTTCCTCCGAACATTGATATTAGTCCATCTGTAGCAGACATGAAGGATGAGGAAGAGGAAAATTCATCTGAAACACTTTCTGCTGTAAAGATCTATGATGATGATGTGAACATGAGACTTCTTGTTTGTGGAGTTCCCTGCACATTGGATGCTTGCTTGTTGGGGTCATTAGAGGATGGACTCAATGCTCTTCTATTTACAGAAATACGAGGATGCAAACTTCACAACAGGACAAGTGCTCCACCACCACCTCTGCAGGCAGGAACATTCTCACGTGGTGTAGTGACTATGCGTTGTGATATTTCCACATGTAGTACTGCTCATATATCACTTTTGGTGTCTGGTAGTGCAGACACTTGTTTTAATGATCAGCTCTTGGAGAATCATATTAAGAAAGAGCTGATTGAGAATAGTCAACTTATTCAGGCATATCCTAATCATGAACAAAGTAAATCACCTTCCTGCGAGCCTCGAAGATCAGCCTCAGTAGCCTGTGGATCTAGTGTGTTTGAAGTTTGTATGAGAGTTCCTGCATGGGCTTCACAGGTTCTGAGACAGCTTGCACCCAGTGTGTCATACCGCAGCCTTGTTATGTTGGGAATTGCTAGCATCCAGGGATTGCCAGTTGCTTCTTTTAATAAAGATGATGCTGAACGCCTTCTTTTCTTTTGTACTAGGCAGGAGAAAGAAAACTCTGCAAATGAACATGTTTTCTCTGGGATTCCAAATTGGCTGAAGCCTCCACCGCCCAGTCGAAAAAGATCTGAACCTTGCTCTGGTACAAAGTCTATCAATGCTAGTGGTAGGGGAATTGAAGATGTTGGTAGTCATAGACAGAAGTTAAATCTTGCTGCTATGAAGCCAATCCCTCAATCTCATAGACACAAGATTCTCCCCTTTTCTGGATTGCCTGCGGGTGCAAGATATGATGGAGATAATGGAAAATCAAATCAGTCTCTTGCTCCTATTAAGCATAATGTTTCAGGCCCTACTTCAGTTACAAATAGGAAATCTGTGTCGAACTCATTCCAAGCTAACCAGATCATTTCTTTGAATCCATTACCTATGAAAAAACATGGTTGTGACAGAGCTCCAATACGGGCTTGCTCAGAGGAGGAATTCCTGAGGGATGTAATGCAATTTTTGATCCTTCGGGGGCATAATCGGCTGATACCGCCAGGTGGGCTTGCTGAGTTCCCTGATGCCATTTTGAATGCAAAACGCCTTGACCTGTTCAACTTGTACAGGGAGGTGGTTTCAAGAGGAGGCTTTCATGTTGGAAACGGTATCAATTGGAAAGGGCAAGTTTTCTCAAAGATGCGGAATCACACTTTGACAAATAGAATGACTGGTGTTGGCAATACACTCAAAAGGCATTACGAAACTTATCTCTTAGAATATGAATTGGCTCACGATGACGTTGATGGAGAGTGCTGCTTGATGTGTCACAGTAGTGCAGCAGGTGACTGGGTGAACTGTGGTGTATGTGGTGAGTGGGCTCATTTTGGCTGTGATAGGCGGCAAGGACTTGGAGCATTTAAGGACTATGCGAAAACCGATGGACTGGAGTATGTTTGTCCTCGCTGCAGCGCCTTAAAATTCAGTAAAAAATCTCAAAAAACTGCAAATGGTTATTAA 2553 0.4367 MPLASSSLSYWFTSTDPIGVVAWRVWDCARDTEVRNLTNWVADFPLNLIWVLPFSSISELYCCAQFLRDKAKTSIPIFFLGWICHLVESLGGIGMGRVEAIVVGVSRHCSLLAVLSGKSRDTKQKQKQSAASEDQPPYPFPELSSSGSLEVKLLIKPTTNELSRALEQLQPEFVYLQGHWLEDRGEIGPLVWEDFDLSAPEALCGLFCSKLPNTVYLETPKGEKLAEALRNKGVPYTIYWKNDFSKYAASHFRHSFFSVAQSTSSHTWDAFQLALASFRLYCIQNNVLPSNSQKGVGKFGPQILGVPPNIDISPSVADMKDEEEENSSETLSAVKIYDDDVNMRLLVCGVPCTLDACLLGSLEDGLNALLFTEIRGCKLHNRTSAPPPPLQAGTFSRGVVTMRCDISTCSTAHISLLVSGSADTCFNDQLLENHIKKELIENSQLIQAYPNHEQSKSPSCEPRRSASVACGSSVFEVCMRVPAWASQVLRQLAPSVSYRSLVMLGIASIQGLPVASFNKDDAERLLFFCTRQEKENSANEHVFSGIPNWLKPPPPSRKRSEPCSGTKSINASGRGIEDVGSHRQKLNLAAMKPIPQSHRHKILPFSGLPAGARYDGDNGKSNQSLAPIKHNVSGPTSVTNRKSVSNSFQANQIISLNPLPMKKHGCDRAPIRACSEEEFLRDVMQFLILRGHNRLIPPGGLAEFPDAILNAKRLDLFNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTLTNRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLMCHSSAAGDWVNCGVCGEWAHFGCDRRQGLGAFKDYAKTDGLEYVCPRCSALKFSKKSQKTANGY 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02781 850 Pfam ARID/BRIGHT DNA binding domain 676 773 IPR001606 GO:0003677
Spst9g02781 850 CDD PHD_ARID4_like 783 834 - -
Spst9g02781 850 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 106 850 IPR042293 -
Spst9g02781 850 MobiDBLite consensus disorder prediction 614 642 - -
Spst9g02781 850 MobiDBLite consensus disorder prediction 617 642 - -
Spst9g02781 850 CDD ARID 675 773 - -
Spst9g02781 850 ProSiteProfiles ARID domain profile. 673 777 IPR001606 GO:0003677
Spst9g02781 850 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 777 840 IPR013083 -
Spst9g02781 850 Gene3D - 670 776 IPR036431 GO:0003677
Spst9g02781 850 MobiDBLite consensus disorder prediction 543 578 - -
Spst9g02781 850 SUPERFAMILY ARID-like 674 788 IPR036431 GO:0003677
Spst9g02781 850 SMART ARID_2 670 773 - -
Spst9g02781 850 SUPERFAMILY FYVE/PHD zinc finger 776 839 IPR011011 -
Spst9g02781 850 MobiDBLite consensus disorder prediction 120 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02781 Spst-Chr9 61996244 62003888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02781 104 849 ARID Transcription Factor Family AT3G43240 65.688 0.0 976
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Spst9g02781 ARID 1.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02781 - - gmx:100808357 1385.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02781 9 61996244 62003888 Spst9g02781 9 61996244 62003888 ECH