Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02775 ATGCTTTTAGTATTAGGAAGTGCAATGACGTGGGTATCCATGTCTGATGCAGTAGTGGTTGGTGGTCACCTGGGGCATGCTCACAATGAATGCAGTCTTACTAGGTATCCCAATTTATGTGCTGAAACCCTGATGCAATCTGGTTCACAGAATCAAAGTGTTGATAACATTTTGACTCTTGTCAACAAGACCATATTCGAAACCAACTTGCCAAGTTCATATTTTGCTGAATTCAGGACTGATGATGCTCATCTAGCCCATTCTCTTGTTGCAGATTATTGTGAAGAGCTAATGAGTATGTCGCTGAAAAGGTTGGACCAAACCCTGAGAGCACTAAAATCCCCAAGGAGAAACAACAATGACATCCAAACATGGCTAAGTGCTTCTCTAACTTTCCAACAATCTTGTAAAGACTATGCACATGCACACTCTGCAGATGACCTTATGCAAATGATGTCCAAGAAGATGGACTATCTTTCCCAATTGGGAAGCAACTCATTGGCTCTGGTTAACCACATGAGCACGACAACTAGCAACAAAGATGGCACTAATGAAGAGGAAAATGAATTTCCCAAGTGGGTATCAGCCAAAGGACGTAAACTGCTTCAAGGAGCCACCATAAAAGCAAATGCAATAGTTGCACAAGATGGTTCAGGAAACTACAAGACAGTTTCTGAAGCCATTAAGGCAGCTTCAGGGGCACGATTTGTGATTTATGTTAAAGAAGGGGTTTATAAGGAGAAGATTCGCACCAACAAGGATGGTATCACCTTGATTGGAGATGGAAAATACTCTACTCTTATTGTCGGAGATGACAGTGTTGCCAAGGGTTCTACCTTACCTGACTCAGCCACGTTTTCAATCACAGGCGATGGCTTTATCGCACGAGACATCGGATTCCAGAACAACGCCGGCCCGCAAGGCGAACAAGCGGTGGCTCTGAACATCGCTTCTGACCATTCCGTCCTCTACCGGTGCAGCATAGCAGGCTACCAAGACACCCTCTACGCCCACGCCCTCCGCCAGTTCTACGCAGAATGCGACATCTACGGCACCATCGATTTCATCTTCGGCAATGCCGCCGCCGTCTTCCAGCGCTGCAACCTCCTCCTCCGCCGCCCCCACGGCTCCAGCTACAACGCCATTCTCGCCAACGGCCGAACCGACCCCGCCCAGAACACCGGCTTCTCGGTTCACAAGAGTACCATAGCGCCCACCGCAGACTTTTCCTCTGTGAAGCACTCGTATTACTCGTTCCTAGGGAGGCCGTGGAAGGAGTATTCCAGATCCGTGGTGATGCAGAGCAGAATCGATGATGCCATTGCGGCGAGTGGGTGGGTGGCGTGGCCTGGTTATGGAAACTCTGTGTTGAAGAGTTTGTATTTCGCGGAGTATGATAACGAAGGAGGTGGTGCTGGAACTGCAAAGAGGGTGCAGTGGCAGGGTTTTCGTGTTCTTCATGCGCAAGAAGCTGGGAAGTTCACCGTTGCTACTTTTCTTGCTGGAAACTCGTGGATTCCCTCCACTGGAGTTACTTTCAGTTCAGGGCTTAATTAA 1557 0.4836 MLLVLGSAMTWVSMSDAVVVGGHLGHAHNECSLTRYPNLCAETLMQSGSQNQSVDNILTLVNKTIFETNLPSSYFAEFRTDDAHLAHSLVADYCEELMSMSLKRLDQTLRALKSPRRNNNDIQTWLSASLTFQQSCKDYAHAHSADDLMQMMSKKMDYLSQLGSNSLALVNHMSTTTSNKDGTNEEENEFPKWVSAKGRKLLQGATIKANAIVAQDGSGNYKTVSEAIKAASGARFVIYVKEGVYKEKIRTNKDGITLIGDGKYSTLIVGDDSVAKGSTLPDSATFSITGDGFIARDIGFQNNAGPQGEQAVALNIASDHSVLYRCSIAGYQDTLYAHALRQFYAECDIYGTIDFIFGNAAAVFQRCNLLLRRPHGSSYNAILANGRTDPAQNTGFSVHKSTIAPTADFSSVKHSYYSFLGRPWKEYSRSVVMQSRIDDAIAASGWVAWPGYGNSVLKSLYFAEYDNEGGGAGTAKRVQWQGFRVLHAQEAGKFTVATFLAGNSWIPSTGVTFSSGLN 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02775 518 NCBIfam pectinesterase inhibitor domain 26 173 IPR006501 GO:0004857
Spst9g02775 518 SMART PMEI_2 22 169 IPR006501 GO:0004857
Spst9g02775 518 PANTHER PECTINESTERASE 19 507 - -
Spst9g02775 518 Pfam Plant invertase/pectin methylesterase inhibitor 29 169 IPR006501 GO:0004857
Spst9g02775 518 SUPERFAMILY Pectin lyase-like 205 516 IPR011050 -
Spst9g02775 518 Gene3D - 204 517 IPR012334 -
Spst9g02775 518 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 174 IPR035513 -
Spst9g02775 518 ProSitePatterns Pectinesterase signature 2. 349 358 IPR033131 -
Spst9g02775 518 FunFam Pectinesterase 25 174 - -
Spst9g02775 518 FunFam Pectinesterase 204 517 - -
Spst9g02775 518 CDD PMEI-like_3 31 175 - -
Spst9g02775 518 Pfam Pectinesterase 210 503 IPR000070 GO:0030599|GO:0042545
Spst9g02775 518 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 173 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02775 Spst-Chr9 61956137 61958931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02775 94 517 Carbohydrate Esterase AT2G45220 49.065 3.61e-131 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02775 K01051 - gmx:100795439 843.958