Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02774 ATGAGGTCGAAATCCTGGAATGTCATTGCGGTTGAGTATGGGTGTCTAAGGCAGAGAGAAGTCTCTGCCCTAGACAGAAGGGACAGTGGAAATGGTAAAAGATATATGAGAACCGTCGAGGGGCTGCTGCTACAAGCAGTTCAAGTGGATCTCTGTTTCATAAGATCTCTGTGCGCAACCACCCCATACCCAGAATCTTGTTTAAGGTCATTGAATATATTCATCTCAACATGCACAACTCCAAATCCAAACATAAACAACTACCTCCTTCAGTCCCTCCAAACAGCAACATCTGAAACCACAAAGCTCTTAAATCTCTTCAACAATGTTGGACACCCAAACATCATAGAGAAGCAAAGAGGAGCAGTTCAAGACTGCCGGGAGCTCCATCAATCCACATTGGCTTCTTTGGAAAGATCCCAAACAGGGATCCGTTCCTCCAGCATGGCCACAATTGTTGTAGCAATTTACCTCAGTGCAGCCCTCACCAACAAGAACACATGTCTAGAAGGCCTAGATTCTGCTACTGGCACCATGAAGCCAGTTCTGGTGAAATCTGTGATCAACACTTACAAGCATGTCAGTAACTCTCTAGCAATTCTCTATAACCCCAAGATGGGGACTCCTGAAATCCCGCCTTTGAAGGGTGATCCAAAGTGGCTATCAAGCAGTGATAAAGAGTTCTTCTTTCAAGACTCGGATGGGGAAGAATATAAACCAAATAAAGTGCTTGTTGTGGCTGCAGATGGAACTGAGCAATTTAGCACCATCACTGAAGCCGTCAACTTTGCTCCAAATAACAGCATGGTTAGGACAGTGATCCATGTCAGAAAAGGTACGTACAAGGAAAATGTGGTAATCCCATTAAATAAGACCAATATTGTGATGCTTGGCGATGGAAGAGATGTTACTGTCATAACCGGTAACAGAGCCAACAGAACTGGATGGTCCATTTTCAGCTCTGCAACACTAGCTGTTTCTGGTAATGGTTTTCTTGCACGTGATATTGCAATCGGGAACAGTGCAGGGCCAAAGAAGTACCAAGCAGTGGCCTTGAGGGTAAATGCAGATTTAACTGCATTCTACAGGTGTGCAATTTATGGTTACCAGGACACTCTATATGTTCACTCCTTTAGACAATTCTACAGGGAGTGTGACATTTATGGGACCATAGATTTCATATTTGGAAATGCAGCAGTGATTCTACAAGATTGTAACATTATATCCAGAAAACCATTGCCTGGTCAAGCTACTGTTATCACTGCACAATCCAGAGATAGCCCTAATGAGCCCACTGGCATCGTAATCCAAAACTGCAATATCACAGCTTCCTTCAACGACAACAGTCTGAAAAGCTACCTCGGGAGGCCATGGAAGCCTTATTCTCGGACCGTTTACCTCGAGTCATTCATTGATGACTTCATTGACCCAAAGGGTTGGACAGAGTGGCCTAATAAGAAAGGATTGGACACCTTGTATTACGGAGAGTATGACAATTATGGACCTGGTTCCACCACAGACTATCGTGTACAATGGTCTGGCTACCATGTAATGGACGATGGTGATGCCTACAATTTCACAGTTTCAAACTTCATTCAAGGTGAAGACTGGCTTGAGTCTACTTTTTTTCCTTTTGATTTAGGTTTTGATTACACAAAATATCCCTAG 1668 0.4353 MRSKSWNVIAVEYGCLRQREVSALDRRDSGNGKRYMRTVEGLLLQAVQVDLCFIRSLCATTPYPESCLRSLNIFISTCTTPNPNINNYLLQSLQTATSETTKLLNLFNNVGHPNIIEKQRGAVQDCRELHQSTLASLERSQTGIRSSSMATIVVAIYLSAALTNKNTCLEGLDSATGTMKPVLVKSVINTYKHVSNSLAILYNPKMGTPEIPPLKGDPKWLSSSDKEFFFQDSDGEEYKPNKVLVVAADGTEQFSTITEAVNFAPNNSMVRTVIHVRKGTYKENVVIPLNKTNIVMLGDGRDVTVITGNRANRTGWSIFSSATLAVSGNGFLARDIAIGNSAGPKKYQAVALRVNADLTAFYRCAIYGYQDTLYVHSFRQFYRECDIYGTIDFIFGNAAVILQDCNIISRKPLPGQATVITAQSRDSPNEPTGIVIQNCNITASFNDNSLKSYLGRPWKPYSRTVYLESFIDDFIDPKGWTEWPNKKGLDTLYYGEYDNYGPGSTTDYRVQWSGYHVMDDGDAYNFTVSNFIQGEDWLESTFFPFDLGFDYTKYP 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02774 555 PANTHER PECTINESTERASE 47 539 - -
Spst9g02774 555 FunFam Pectinesterase 237 549 - -
Spst9g02774 555 ProSitePatterns Pectinesterase signature 2. 387 396 IPR033131 -
Spst9g02774 555 Pfam Pectinesterase 244 535 IPR000070 GO:0030599|GO:0042545
Spst9g02774 555 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 201 IPR035513 -
Spst9g02774 555 Gene3D Invertase/pectin methylesterase inhibitor family protein 49 203 IPR035513 -
Spst9g02774 555 CDD PMEI-like_3 56 204 - -
Spst9g02774 555 NCBIfam pectinesterase inhibitor domain 53 202 IPR006501 GO:0004857
Spst9g02774 555 Gene3D - 238 549 IPR012334 -
Spst9g02774 555 Pfam Plant invertase/pectin methylesterase inhibitor 53 200 IPR006501 GO:0004857
Spst9g02774 555 SUPERFAMILY Pectin lyase-like 240 547 IPR011050 -
Spst9g02774 555 SMART PMEI_2 49 200 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02774 Spst-Chr9 61946465 61949836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02774 56 548 Carbohydrate Esterase AT2G26440 58.121 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02774 - - gmx:102665651 732.635