Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02773 ATGGCTTATTCATCTCACAAACTTCTCTTCCTTCTCTTTGCAATCTTCTACTCACACACTTGTGCTGTCAACTCCTCCAATGCTTCCACAACACTTCATACCAATCTCTCTTCCTTAAGATCTTTCTGCAGAACCACCCCATACCCAGAAGTTTGTTTCAATTCTTTGAAGCTATCCATCTCAATAAACATTAGTCCAAATATTATCAACTACCTCCTTCAGTCCCTCCAAGTAGCAATATCTGAAACCACAAAGCTATCCAATATCTTCCATAATGTTGGACACTACAACATCGTAGAGAAGCAGAGAGGAGCAGTTCAGGACTGCCGGGAGCTCCACCAATCCACATTGTCTTCTTTGAAAAGATCACTATCAGGGATCCGTTCCTCCAACTCCATGAACATAGTTGATGCAAGAGCCTACCTCAGTGCAGCCCTCACCAACAAGAACACATGCCTAGAAGGCCTAGATTCTGCTTCTGGCACCATGAAGCCAGCTCTGGTGAAATCTGTGATCAACACTTACAAGCATGTCAGTAACTCTCTTTCTATGCTCCCTAAGCCTGAGATGGGGACTCCCAAAGGCCAAAAGAATAACCAGTCTTTCATGAATGTTCCTAAGTGGTTATCAAGCAGGAACCAAAGCCTCTTTCAAGACTGGGATGGGGAAGAATATGACCCAAATGAAGTGCTAGTTGTGGCTGCAGATGGAACTGGGAACTTTAGCACCATCACTGAAGCTATCAACTTTGCTCCAAATAACAGCTTGGATAGGACGTTGATCTATGTCAAAGAAGGGATTTATGAGGAAAACCTTGAAATCCCAAGCTATAAGACCAACATTATCATGCTTGGCGATGGAAGTGATGTCACTGTCGTAACTGGTAACAGAAGCGTTGGTGATGGCTGGACCACTTTCAGATCTGCAACTCTAGCGGTTTCTGGTGATGGTTTTCTTGCACGTGATATTGCAATCGAGAACAGTGCAGGGCCAGAGAAGCACCAAGCAGTGGCCTTGAGGGTAAATGCAGATTTAACTGCGTTCTACAGGTGTGCAATTTATGGTTACCAGGACACTCTATATGTTCACTCCTTTAGACAATTCTACAGGGAGTGTGACATTTATGGGACCATAGATTTCATATTTGGAAATGCAGCAGTGATTCTACAAGATTGTAACATTATATCCAGAAAACCATTGCCAGGTCAATTCACTGCTATCACTGCACAATCCAGAGATAGCCCTGATGAGGACACTGGCATCTCAATCCAAAACTGCTCAATCATAGCTACCCTTGATCTGTACTCCAACTCTAGTAGCTTCAAGAGCTACCTTGGGAGGCCATGGAGGATCTATTCTCGCACTGTTTACCTCGAGTCTTACATTGATAGCTTCATTGATCCAAGGGGTTGGACAAAGTGGTCTAGTGAGCAAACATTGGACTCATTGTATTATGGAGAATATGACAACTATGGACCTGGTTCCACCACAGATAATCGTGTCCAATGGTTTGGCTACCATTTGATGGATTACAGTGATGCCTATAATTTCACAGTTTCGGAGTTCATCAATGGAGATGGTTGGCTTGCTACTACTTCAGTACCTTATGATGATGGGATTTGA 1623 0.4344 MAYSSHKLLFLLFAIFYSHTCAVNSSNASTTLHTNLSSLRSFCRTTPYPEVCFNSLKLSISINISPNIINYLLQSLQVAISETTKLSNIFHNVGHYNIVEKQRGAVQDCRELHQSTLSSLKRSLSGIRSSNSMNIVDARAYLSAALTNKNTCLEGLDSASGTMKPALVKSVINTYKHVSNSLSMLPKPEMGTPKGQKNNQSFMNVPKWLSSRNQSLFQDWDGEEYDPNEVLVVAADGTGNFSTITEAINFAPNNSLDRTLIYVKEGIYEENLEIPSYKTNIIMLGDGSDVTVVTGNRSVGDGWTTFRSATLAVSGDGFLARDIAIENSAGPEKHQAVALRVNADLTAFYRCAIYGYQDTLYVHSFRQFYRECDIYGTIDFIFGNAAVILQDCNIISRKPLPGQFTAITAQSRDSPDEDTGISIQNCSIIATLDLYSNSSSFKSYLGRPWRIYSRTVYLESYIDSFIDPRGWTKWSSEQTLDSLYYGEYDNYGPGSTTDNRVQWFGYHLMDYSDAYNFTVSEFINGDGWLATTSVPYDDGI 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02773 540 Pfam Pectinesterase 231 526 IPR000070 GO:0030599|GO:0042545
Spst9g02773 540 FunFam Pectinesterase 35 187 - -
Spst9g02773 540 Pfam Plant invertase/pectin methylesterase inhibitor 38 184 IPR006501 GO:0004857
Spst9g02773 540 SUPERFAMILY Pectin lyase-like 228 537 IPR011050 -
Spst9g02773 540 NCBIfam pectinesterase inhibitor domain 8 185 IPR006501 GO:0004857
Spst9g02773 540 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 187 IPR035513 -
Spst9g02773 540 PANTHER PECTINESTERASE 16 530 - -
Spst9g02773 540 Gene3D - 226 540 IPR012334 -
Spst9g02773 540 FunFam Pectinesterase 224 540 - -
Spst9g02773 540 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 185 IPR035513 -
Spst9g02773 540 CDD PMEI-like_3 41 184 - -
Spst9g02773 540 ProSitePatterns Pectinesterase signature 2. 374 383 IPR033131 -
Spst9g02773 540 SMART PMEI_2 34 184 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02773 Spst-Chr9 61936852 61943732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02773 20 540 Carbohydrate Esterase AT2G26440 65.094 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02773 - - gmx:100776969 976.467