Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02772 ATGGCTGTTTTCTGGACAAAACCGCTGGCTCCAATTCCCTCTGCCACCTTCATCTGCATCTTCTTCTTCTTTATTCCCTCTGAATTCGCGAGACTCCATAGCCTGGAAGTTTCTCCGTCCGAATTCATAGGCTCCGTGAGAACAATAGGTGATGTTTTGCAAAATGTTACCTCCACTCTCAAATCTGAGTCCATTAATGTCGAAAGTGAGTTTCCTCTTTCTGATGCCGTTTTAGCATGTCTGGAGTTGTTGGACTTGTCAGCTGATGAACTCAGCTGGTCCATTTCCGCTGTTCAAAATCCCCAAGGGAAGCATAACAGTACTGGGAATCTGAGCTCTGATTTAAGGACATGGATAAGTGCTGTACTTGCGAACACAGACACGTGCATGGATGGTTTGGAAGGTACAAGTGAGAATGTGAAAAGTTTGATATCCAACGAAATTGAGGAAGCAAAGTGGTTGCTCCAAAAGCTGGTGAACCAGGTGAAGCTTGTTTCGGATGATTTCGGAAGCGACAGATTTCCTTCATGGGTTGAACCACTTCTGCAGAGAAAAAAGGTGGATGCAGATGCTGTAGTTGCTGCAGATGGGAGTGGTGATTTCACAAAGGTGATGGATGCTGTGAATGCAGCTCCTGAATATAGCATGAGACGCTTTGTGATACACATAAAGAAGGGTGTGTACACTGAGAAAGTTGAGATTAAGAAGAAGAAGTGGAACCTTGTGATGATTGGAGAGGGTATGGATGTTACTGTGATCTCCTTTAACCTCAGTCATACTGAAACATTAAGCACACTCAGGACTGCTACCTTTGCTGTGAATGGGAGAGGGTTCATAGCAAGAGACATTTCCTTCAGGAACACTGCAGGACCCCAAAGAAACCAAGCTGTTGCTCTGAGATCAGACTCTGACCTTTCTGTGTTCCACCGATGTGGGATTTTTGGCTACCAAGACAGCCTCTATGCCCACTCCTTGCGCCAATTTTACAGAGAATGTACAATTAGTGGCACAGTGGATTTCATATTTGGACATGCCAAAGCAGTGTTCCAGAACTGCACAATATTGGTAAAAAAAGGCTTACAAGGCCAGAAGAACACAATCACAGCTCAAGGAAAAGCTTACATTTCTCAATCATCTGGTTTCTCCATCCAATTCTGCAACATTTCAGCAGATTATGACCTTCTTCCCTCACTTAACACCACCTCAACCTACCTTGGAAGACCCTGGAAGAATTATTCTAGAACAGTCTTCATGCAGTGTTACATCAGTGAGGTGTTAAGACCAGAAGGGTGGCTAGAGTGGGATGGACCATTGTATTTGGACACTTTGTTCTTTGGTGAGTACAAGAATTATGGAGCAGGAGCTAGGCTAGATAACAGGGTGAAATGGCCAGGGTACCATGTGATAAATGATTCTAGCCAGGTTTACAACTTCACTGTGGCCAATCTCATTTTGGGGGATCTATGGTTACCTTCAACAGGTGTAACATACACTCCTGGATTTGGGGATTAA 1512 0.4418 MAVFWTKPLAPIPSATFICIFFFFIPSEFARLHSLEVSPSEFIGSVRTIGDVLQNVTSTLKSESINVESEFPLSDAVLACLELLDLSADELSWSISAVQNPQGKHNSTGNLSSDLRTWISAVLANTDTCMDGLEGTSENVKSLISNEIEEAKWLLQKLVNQVKLVSDDFGSDRFPSWVEPLLQRKKVDADAVVAADGSGDFTKVMDAVNAAPEYSMRRFVIHIKKGVYTEKVEIKKKKWNLVMIGEGMDVTVISFNLSHTETLSTLRTATFAVNGRGFIARDISFRNTAGPQRNQAVALRSDSDLSVFHRCGIFGYQDSLYAHSLRQFYRECTISGTVDFIFGHAKAVFQNCTILVKKGLQGQKNTITAQGKAYISQSSGFSIQFCNISADYDLLPSLNTTSTYLGRPWKNYSRTVFMQCYISEVLRPEGWLEWDGPLYLDTLFFGEYKNYGAGARLDNRVKWPGYHVINDSSQVYNFTVANLILGDLWLPSTGVTYTPGFGD 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02772 503 Pfam Plant invertase/pectin methylesterase inhibitor 61 158 IPR006501 GO:0004857
Spst9g02772 503 PANTHER PECTINESTERASE 49 491 - -
Spst9g02772 503 Pfam Pectinesterase 190 487 IPR000070 GO:0030599|GO:0042545
Spst9g02772 503 SUPERFAMILY Pectin lyase-like 188 500 IPR011050 -
Spst9g02772 503 FunFam Pectinesterase 184 501 - -
Spst9g02772 503 Gene3D Invertase/pectin methylesterase inhibitor family protein 44 165 IPR035513 -
Spst9g02772 503 SMART PMEI_2 25 165 IPR006501 GO:0004857
Spst9g02772 503 CDD PMEI-like_4 34 166 - -
Spst9g02772 503 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 73 150 IPR035513 -
Spst9g02772 503 ProSitePatterns Pectinesterase signature 2. 334 343 IPR033131 -
Spst9g02772 503 Gene3D - 184 501 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02772 Spst-Chr9 61929607 61931489 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02772 24 501 Carbohydrate Esterase AT3G43270 53.815 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02772 K01051 - gmx:100798620 744.191