Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02771 ATGGCGCTTTCTTCAACCAAAGAGTTATCTCCAACAGTGGCCACACTAGCACTCGTCTTCTTCCTTTTGTTTTCCCAGAGTGTGTTTGGTGCCTCATTTGGCAGGACCACTAACACCGTCGGATCGGAGTTGCTGAAGGTTTCGCCTTCAGAGTTCGAGGGGACAGTGAAAAGTGTGGTTGATGTGTTGCAAGATGTGACCTCCATTCTCTCTGAGTTCGGTTCTGGCTTCGGAGACTTGCGTCTTTCTAACGCCATCTCTGATTGTCTAGATTTGCTTGACCTCTCCTCTGATGAACTTGATTGGTCTGTCTCTGCTACCCAGACTCCCCAAGGGAAGCATAACAGTACAGGGAAGCTAAGTTCAGATTTGAGGACATGGCTAAGTGCTGCACTTGCGAACCAAGACACATGCATGGACGGATTCGACGGCACCAACGGCATTGTGAAGGATTTAGTGTCCTCGGGGCTAGGCCAAGTTATGTCATTGCTGCAACAACTTCTCACACAGGTGAACCCCAATTCGAACCAATTCCCTTCCTCTTCCACACAGGGGCAGTTTCCGAGGTGGGTCAAACCAGGGGACAGGAAGCTGCTTCAGGCAAATGGGTTGGTCGTGGATGCGGTGGTTTCTACCGATGGCACCGGGAACTTCACCAAACTCATGGACGCTGTCTTGGCTGCGCCTAATTACAGCATGAAACGCTACGTGATATACGTGAAGAGAGGGGTTTACCATGAGAACGTTGAGATCAAGAAGAAGAAGTGGAACCTCATGATGATCGGAGAAGGCATGGATGCTACTATCATCTCCGGTAACAGGAGCTACATCGACGGTTGGACCACGTTTCGGTCAGCAACTTTTGCTGTGAGTGGCAGAGGATTCATAGCACGAGACATTACCTTCCAGAACACAGCAGGAGCAGAGAAGCACCAAGCAGTGGCACTCAGATCAGACTCTGACCTCTCTGTGTTCTACCGATGTGGCATTTATGGCTACCAAGACACCCTCTACACTCACACCATGCGCCAATTCTACAGAGAATGCAGAATCAGTGGCACCGTGGATTTCATTTTTGGTGATGCCACTGCCATTTTCCAAAACTGCCACATAGAGGCCAGAAAAGGGTTACCAAATCAGAAGAACACCATCACAGCTCATGGCAGGAAAACCCCTGATGAACCAACTGGTTTCTCCATCCAGTTTTGCAACATTTCTGCTGATTCTGACCTTGTCAACTCGGTTAACTCCACCCACACGTACCTTGGCAGACCCTGGAAGCAATATTCTAGAACAATTTTCATGCAATCTTACATCAGTGATGTGGTGCGGCCAGAAGGGTGGTTGGAGTGGAATGGGGACTTTGCCTTGGACACATTGTACTATGCAGAGTACTTGAATTATGGGCCCGGTTCAGGGCTTTCTAACCGAGTGAAATGGCCAGGGTACCATGTCATGAATGATTCTAGCCAGGCTAGTAATTTCACAGTATCACAATTTATTGAGGGGAATCTCTGGTTACCATCAACTGGTGTAGCATTCACAGCTGGATTGAACGAATGA 1563 0.4869 MALSSTKELSPTVATLALVFFLLFSQSVFGASFGRTTNTVGSELLKVSPSEFEGTVKSVVDVLQDVTSILSEFGSGFGDLRLSNAISDCLDLLDLSSDELDWSVSATQTPQGKHNSTGKLSSDLRTWLSAALANQDTCMDGFDGTNGIVKDLVSSGLGQVMSLLQQLLTQVNPNSNQFPSSSTQGQFPRWVKPGDRKLLQANGLVVDAVVSTDGTGNFTKLMDAVLAAPNYSMKRYVIYVKRGVYHENVEIKKKKWNLMMIGEGMDATIISGNRSYIDGWTTFRSATFAVSGRGFIARDITFQNTAGAEKHQAVALRSDSDLSVFYRCGIYGYQDTLYTHTMRQFYRECRISGTVDFIFGDATAIFQNCHIEARKGLPNQKNTITAHGRKTPDEPTGFSIQFCNISADSDLVNSVNSTHTYLGRPWKQYSRTIFMQSYISDVVRPEGWLEWNGDFALDTLYYAEYLNYGPGSGLSNRVKWPGYHVMNDSSQASNFTVSQFIEGNLWLPSTGVAFTAGLNE 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02771 520 FunFam Pectinesterase 201 518 - -
Spst9g02771 520 CDD PMEI-like_4 18 175 - -
Spst9g02771 520 PANTHER PECTINESTERASE 52 508 - -
Spst9g02771 520 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 172 IPR035513 -
Spst9g02771 520 SMART PMEI_2 25 170 IPR006501 GO:0004857
Spst9g02771 520 Pfam Pectinesterase 207 504 IPR000070 GO:0030599|GO:0042545
Spst9g02771 520 NCBIfam pectinesterase inhibitor domain 55 161 IPR006501 GO:0004857
Spst9g02771 520 Gene3D - 205 520 IPR012334 -
Spst9g02771 520 FunFam Pectinesterase 31 173 - -
Spst9g02771 520 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 164 IPR035513 -
Spst9g02771 520 SUPERFAMILY Pectin lyase-like 207 517 IPR011050 -
Spst9g02771 520 ProSitePatterns Pectinesterase signature 2. 351 360 IPR033131 -
Spst9g02771 520 Pfam Plant invertase/pectin methylesterase inhibitor 78 155 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02771 Spst-Chr9 61924782 61927942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02771 14 518 Carbohydrate Esterase AT3G43270 63.250 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02771 K01051 - gmx:100801813 872.078