Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02769 ATGGGTGGTGCTGTCACTGTCAAGTCCGAGGTCTCCCTTCTAGAATCTTCTCCCCCTCCTGTGGAGAAACCTGAAGGAGTTTGTTCCAATACGGAGGAACACCACCTGGGCCAACCCAATATGCATGACTCCTCACCCAACAAGTCAGTGCCAGCATCTGGACTTAATGCAGTGATTCCTAGTACAAACCAACTTACCATCTTCTACAATGGGAGTGTTTGTGTCTATGATGGAATCCCTGCAGAAAAGGTGCATGAAATAATGCTCATTGCTGCAGCTGCTGCTGCCAAGTCTACTGAAATGAAGAAGATTGGGACCCAATCTACCCTCATTTCACCTGTTCCCACAAGGCCTTCTTCTCCACATGGAATCACTAACAATATTGCTTCCTCCCAGAAGAATTCCATCTGCAGGCTTCAAGAATTTCCAATAGCACGCAGGCATTCACTTCAAAGGTTTCTTGAGAAACGGCGAGATAGGTTGGGTAGCAAAGCTCCTTATCCTTCCTCATCAACTACAAAAGTGGAAGATAACATAGACAACAACTTTTGTGCTGACAATGCACCAGAACTGGTTTCCTTGAATCGAGCAGAGGAGGAATTTCAGCCAACTGTCTCTGCCTCTTGA 627 0.4625 MGGAVTVKSEVSLLESSPPPVEKPEGVCSNTEEHHLGQPNMHDSSPNKSVPASGLNAVIPSTNQLTIFYNGSVCVYDGIPAEKVHEIMLIAAAAAAKSTEMKKIGTQSTLISPVPTRPSSPHGITNNIASSQKNSICRLQEFPIARRHSLQRFLEKRRDRLGSKAPYPSSSTTKVEDNIDNNFCADNAPELVSLNRAEEEFQPTVSAS 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02769 208 ProSiteProfiles Tify domain profile. 58 93 IPR010399 -
Spst9g02769 208 MobiDBLite consensus disorder prediction 1 53 - -
Spst9g02769 208 Pfam tify domain 60 92 IPR010399 -
Spst9g02769 208 SMART tify_2 58 93 IPR010399 -
Spst9g02769 208 MobiDBLite consensus disorder prediction 161 181 - -
Spst9g02769 208 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 43 174 IPR040390 -
Spst9g02769 208 Pfam Jas motif 143 167 IPR018467 -
Spst9g02769 208 MobiDBLite consensus disorder prediction 165 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02769 Spst-Chr9 61885464 61888193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02769 63 176 Tify Gene Family AT5G20900 50.820 9.00e-28 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Spst9g02769 tify 1.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02769 K13464 - gmx:100306045 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02827 3 77814890 77817354 Spst9g02769 9 61885464 61888193 PCT