Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02756 ATGGAAGAAAAACCTTCTTTAAAAAAATTGCTGGACGATGAAGAAAGGCCTTCTGATAGTAATACAAACACAGGGAACAGAACCGATGAACCCTCCCTTCATAATACTATGGGGTCTACTCTTCTCAGCTTGAGCCTGAATAACTCAGGACAGCCCCTTAACCAAATGGGCATGCTGAGAATCAAGCTTGAGGAAGCAAAGAAAGAGAATGAAATCTTGAAGGCTATGCTGAATCAAGTCAATGAACACCTCGCTGTTCTTCAGAATCGCATACTTTTTGAGATGCAGCAGCATCAACCATCTTCATCACCTTGCAATAATAACAATAATCATGACTCGAAGGAAAAAATACAAGATTCGGGGAAACCAATGCTGCAGACTCGACAGTTTTTGAATATTGGTGAGTGTTCTTCAGTTTTTGAGGGTAACACAGAAAAAATTGAAAAGAAAATGTTAGGCAGAAACTTCGCATGTGACAAAAACAACGTGGAGGGTGAAATCAACAAAAACATAACATCAAATGAAGCAAAATGCACAGAAGATCAAGCATCTGAGGTTACTTGCAGAAGAGCTAAAGTATCCATAAGAGCACGATCAGATTTTTCTTTGATTCAACACAAAACAATTGGGAAACACATTGAAATAGGAGATGGGTGTCAATGGAGAAAGTACGGACAAAAGACGGCGAAAGGCAACCCTTGTCCCCGAGCCTACTACCGTTGCAGCATGGGCACTGCATGTCCAGTTCGTAAGCAGGTGCAAAGGTGTTTTAAGGATGAGACTGTGCTCATCACAACCTATGAAGGGAACCATAACCATCCACTCCCACCAGCAGCCAGACCTTTGGCAAGCTCAACATCAGCAGCATTGAACATGTTCCTTTCTGGTTCACTCACAAGTTCAGTAGTTAGCACCACTCAATCAAACGCACCCCTCTTCTCTTCATCACTATCTACTATTTCTCCAACTGCAATAGCTACTTTCTCCCACAATGCAACATGTCCCACAGTAACACTGGACTTGACCCAGCCCAGCAACAACAATAACTATCTCCAATTCCAAAGGGCCACCACACAACACCCACTGTTCCCTCTCCCACTTCATGGCCACCCTCATAATTCTCATGAGGGGTTCCACTTGTTTTCCAAGGTTCCCACCTTGTTAACCCCAGACAAAAACCTTGCATTGGTGGATGTTGTTAGTGAGGCTATAACCAAAGACCCTTCTCTCAAGGCAGCTCTTTTTTCAGCCATTTCCTCACTCACTGGAGATCCTCAGAAGAACAGCAATAACCACAGCCAACAAAGTAAGAGTAGCAGTGGTTATGACCCTTGTTCTAAGATGCCTGCAATACCACCTCATCAGCCTTACACTACTGAGTTGATATAG 1389 0.4327 MEEKPSLKKLLDDEERPSDSNTNTGNRTDEPSLHNTMGSTLLSLSLNNSGQPLNQMGMLRIKLEEAKKENEILKAMLNQVNEHLAVLQNRILFEMQQHQPSSSPCNNNNNHDSKEKIQDSGKPMLQTRQFLNIGECSSVFEGNTEKIEKKMLGRNFACDKNNVEGEINKNITSNEAKCTEDQASEVTCRRAKVSIRARSDFSLIQHKTIGKHIEIGDGCQWRKYGQKTAKGNPCPRAYYRCSMGTACPVRKQVQRCFKDETVLITTYEGNHNHPLPPAARPLASSTSAALNMFLSGSLTSSVVSTTQSNAPLFSSSLSTISPTAIATFSHNATCPTVTLDLTQPSNNNNYLQFQRATTQHPLFPLPLHGHPHNSHEGFHLFSKVPTLLTPDKNLALVDVVSEAITKDPSLKAALFSAISSLTGDPQKNSNNHSQQSKSSSGYDPCSKMPAIPPHQPYTTELI 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02756 462 MobiDBLite consensus disorder prediction 1 37 - -
Spst9g02756 462 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 53 435 IPR044810 GO:0003700
Spst9g02756 462 MobiDBLite consensus disorder prediction 1 20 - -
Spst9g02756 462 MobiDBLite consensus disorder prediction 21 37 - -
Spst9g02756 462 SUPERFAMILY WRKY DNA-binding domain 212 276 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst9g02756 462 Coils Coil 56 90 - -
Spst9g02756 462 MobiDBLite consensus disorder prediction 421 443 - -
Spst9g02756 462 Gene3D WRKY domain 197 277 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst9g02756 462 MobiDBLite consensus disorder prediction 421 462 - -
Spst9g02756 462 ProSiteProfiles WRKY domain profile. 217 276 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g02756 462 SMART WRKY_cls 215 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g02756 462 Pfam WRKY DNA -binding domain 217 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst9g02756 462 MobiDBLite consensus disorder prediction 98 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02756 Spst-Chr9 61797601 61801953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02756 59 343 WRKY Transcription Factor Family AT4G04450 38.994 2.29e-59 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst9g02756 WRKY 1.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02756 - - gmx:100816719 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02756 9 61797601 61801953 Spst3g02846 3 77990590 78002410 PCT