Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02752 ATGGTGATTGCAAACTTTGGGAGAAAGGAGGCGCAGGTAATGCGACTCGGGAAATACGAGTTGGGAAAGACTCTTGGAGAAGGCAATTTTGGAAAGGTCAAGTTGACAAGGGACACTAATTCTGGCAAGCTTTTTGCTGTTAAGATCCTTGAGAAGAGAAAGATCATTGACCTCAATAACACTGATCAGATAAAAAGGGAAATATCTACCTTGAAGCTTCTGAAGCACCCGAATGTTGTTAGATTATACGAGGCATCCAAAGGTAAACTTACAGAAGATGAAGGTAGGAAGATATTCCAACAGTTGATTGATGGTGTGAGTTTCTGCCACAATAAAGGTGTTTTCCACAGGGATCTTAAGCTGGAGAATGTACTTGTGGATGCCAAAGGGAACTTAAAGATAACCGATTTTAATCTTAGTGCTTTGCCCCAGCATTTTAGGGATGATGGATTGCTTCATACTACTTGTGGAAGTCCCAACTATGTTGCTCCTGAGATTCTTGCCAACAAAGGCTATGATGGTGCAACATCAGATATATGGTCATGTGGTGTTATCTTGTATGTAATTCTTACAGGATACCTTCCTTTCGATGACAGAAATCTTGCAGTTCTTTATCAAAAGATTTTTAAAGGAGATGTTCAGATACCAAGATGGCTATCACCTGGTGCCCAAAACATTATAAAAAGAATGCTTGATCCCAATCCTAAAACCCGGATAACAATGGCTATGATCAAAGAACATGAATGGTTCAAGGAGGATTACACTCCTGCAAATCCAGAAGATGAGGAAGAGGGTGTGTACATTGATGATGAAGCATTTTCCATCCATGATGTGTCACTAGAATCAGATCAGGGTAGCCCAAGATCACCACCACTTATCAATGCATTCAAGTTGATAGGGATGTCTTCAAGTCTAGATCTGTCTGGCCTTTTTGAGAAAGAGGATGTTTCTGAGCGGAAGATAAGGTTTACATCCACCCACACACCAAAAGTTTTGGAAGAGAGGATAGAAGACATTGTAACTGAAATGGGGTATAGAGTCCAGAAGAAAAATGGGATGTTGAAAGTGAAACAGATCAAAGCACCAAAAGGTCTAGATACTCTCTCAATGGCTATAGAGGTGTTTGAAATTAGTCCATCCTTGTATGTGGTAGAGTCAAGCAAGTCTGGTGGAGATGCTTCTGAGTATAGACAGTTATGCCAGAAGTTATCAAATGAATTGGGTGTTCACCCAAACCAACAGCTAGGGAGCTCAGAAATGATAAGCTTGAGAAAACAGGATTTGGAAGAAACATGA 1296 0.4043 MVIANFGRKEAQVMRLGKYELGKTLGEGNFGKVKLTRDTNSGKLFAVKILEKRKIIDLNNTDQIKREISTLKLLKHPNVVRLYEASKGKLTEDEGRKIFQQLIDGVSFCHNKGVFHRDLKLENVLVDAKGNLKITDFNLSALPQHFRDDGLLHTTCGSPNYVAPEILANKGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKGDVQIPRWLSPGAQNIIKRMLDPNPKTRITMAMIKEHEWFKEDYTPANPEDEEEGVYIDDEAFSIHDVSLESDQGSPRSPPLINAFKLIGMSSSLDLSGLFEKEDVSERKIRFTSTHTPKVLEERIEDIVTEMGYRVQKKNGMLKVKQIKAPKGLDTLSMAIEVFEISPSLYVVESSKSGGDASEYRQLCQKLSNELGVHPNQQLGSSEMISLRKQDLEET 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02752 431 CDD CIPK_C 294 404 - -
Spst9g02752 431 Gene3D Phosphorylase Kinase; domain 1 4 88 - -
Spst9g02752 431 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Spst9g02752 431 FunFam Non-specific serine/threonine protein kinase 81 257 - -
Spst9g02752 431 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 11 398 - -
Spst9g02752 431 Pfam Protein kinase domain 87 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02752 431 Pfam Protein kinase domain 19 86 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02752 431 Pfam NAF domain 291 349 IPR004041 GO:0007165
Spst9g02752 431 ProSiteProfiles NAF domain profile. 288 312 IPR018451 GO:0007165
Spst9g02752 431 FunFam Aurora kinase A 11 90 - -
Spst9g02752 431 Gene3D Kinase associated domain 1, KA1 288 409 - -
Spst9g02752 431 SMART serkin_6 19 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02752 431 MobiDBLite consensus disorder prediction 410 431 - -
Spst9g02752 431 FunFam Non-specific serine/threonine protein kinase 290 410 - -
Spst9g02752 431 SUPERFAMILY Protein kinase-like (PK-like) 16 292 IPR011009 -
Spst9g02752 431 ProSiteProfiles Protein kinase domain profile. 19 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02752 431 Gene3D Transferase(Phosphotransferase) domain 1 89 285 - -
Spst9g02752 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 114 126 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02752 Spst-Chr9 61746463 61750719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02752 85 414 CBL-interacting serine-threonine protein kinases AT3G17510 68.675 1.95e-154 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst9g02752 Pkinase 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02752 K07198 - gmx:100815660 706.442