Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02743 ATGGCATCAAATCCTGAAAACAGCCTCTCCACTTATGAGGGCAACCCTCGGATCATTCACAGGGATATCAAGTCGTCAAACATTCTTTTAGATTTCAATTGTGAAGCAAAGGTCTCAGATTTTGGGCTAGCCAAATTAGCTCTGGATGCAAATACGCATATTACCACACGAGTTATGGGAACTTTTGGGTATGTTGCCCCCGAATATACTTCAAGTGGCAAATTGACTGAGAAGTCTGACGTATATTCTTTTGGAGTCGTGCTTTTGGAGCTAATTACTGGGCGAAAACCAGTGGATGTATCCCAACCTTTGGGAGATGAAAGCTTGGTTGAATGGGCTCGGCCTTTGCTGAGTCATGCAATCGATAGTGAGGAATTGATTAGTTTGGCAGATCCAAGGCTAGAAAAGAATTATGTTGAGAGTGAATTGTATTGCATGATTGAGGTTGCTGCTGCTTGTGTGCGGCATTCAGCTTCAAAGAGACCTCGCATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGGAGGTACTGATCTAACCAATGGAATGAGACTTGGGGAAAGCGAAGTGTTTGACTCTGCACAGCAATCTGAAGAAATAAGATTATTCCGTAGGATGGCATTTGGTAGTCAAAATTATAGCACAGACTTCTTTAGCCATGCTAGTTTGAATCCATGA 678 0.4263 MASNPENSLSTYEGNPRIIHRDIKSSNILLDFNCEAKVSDFGLAKLALDANTHITTRVMGTFGYVAPEYTSSGKLTEKSDVYSFGVVLLELITGRKPVDVSQPLGDESLVEWARPLLSHAIDSEELISLADPRLEKNYVESELYCMIEVAAACVRHSASKRPRMGQVVRAFDSLGGTDLTNGMRLGESEVFDSAQQSEEIRLFRRMAFGSQNYSTDFFSHASLNP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02743 225 SUPERFAMILY Protein kinase-like (PK-like) 16 173 IPR011009 -
Spst9g02743 225 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 15 206 IPR047117 -
Spst9g02743 225 Gene3D Transferase(Phosphotransferase) domain 1 9 183 - -
Spst9g02743 225 ProSiteProfiles Protein kinase domain profile. 1 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02743 225 Pfam Protein kinase domain 17 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02743 225 FunFam proline-rich receptor-like protein kinase PERK8 8 185 - -
Spst9g02743 225 ProSitePatterns Serine/Threonine protein kinases active-site signature. 18 30 IPR008271 GO:0004672|GO:0006468
Spst9g02743 225 SMART serkin_6 1 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02743 Spst-Chr9 61650570 61652608 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02743 15 222 Trihelix Transcription Factor Family AT5G38560 71.163 1.28e-105 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Spst9g02743 Pkinase 1.6e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02743 - - vun:114173712 400.593