Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02735 ATGTTACGTGGCAGACACGGCATTGTTCTTCAATTGGCCTTTTCATATAAAAATATCACATCAATGGAGCAGTTGAAATTGGCTACAAATTCTGACGCCAAAGAGGATAACCCTTTTGGGAACAAGTCAATAAATAACAATGCATTTGAGTCTTCTGACAGTCTAAGGAAAAGAAAGATATCAGCTCGATGGGATCCGGTTGGAGCATGTCGGCCTATAATTGAAGAAGCACCTGTTTTTTATCCAACTATTGAAGAGTTTGAAGACACACTCAGTTACATAGCCAAGATAAGACCCCTGGCTGAATCCTATGGCATATGTAGGATTGTTCCTCCAGCTTGCTGGGCTCCACCCTGTCCTCTTAAGGAGAAAGATTTATGGGAAAATGCTGCATTTCCCACCCGTATTCAGCAAATTGATTTGCTTCAAAATAGGGAACCTATGAGGAAAAAAAGTAGGGGAAGGAAGCGAAAACGTAGAAGGCACTCTAGAACAGGCACATGTAGGAAGAAGCCTGCCAATCAAGCTTTGAATTCTTCTGAGTCTGAAGAGAAATTCGGATTTCAATCAGGATCAGACTTCACGCTTAAAGACTTTCAGCAATATGCTAATTTTTTTAAGGAATGCTATTTTGGGTTGAAAGATGCAAATGTAGACAGAACTGTTAGTGAGAGTAACCATCAGACAAGATGGGAGCCCTCTGAGGAGGAAATTGAAGGTGAATACTGGCGAATAATTGAGCAACCAAGTGATGAGGTTGAGGTGTATTATGGAGCTGACTTGGAAACTGGATCACTTGGAAGTGGTTTTCCTAAGGCATCATCCATAACTACAAGTGACTCAGATCAATATGTCCTGTCTGGTTGGAATCTGAACAATTTCCCGCGACTGCCAGGTTCTGTACTAAGCTACGAGGGAAGTGACATATCAGGAGTTCTAGTGCCATGGCTGTATGTTGGCATGTGTTTTTCCTCATTTTGCTGGCATGTTGAGGACCATCACCTCTATTCACTAAACTATTTGCATTGGGGTGACCCAAAAGTATGGTATGGAGTACCTGGAAACCACGCTCCAGCCTTGGAAAACGCAATGAGGAAGTACTTACCAGATTTATTTGAGGAACAACCAAATCTACTAAATGAACTGTTTGTTCATTTCAAGTCTAGTGATGATGAGATGCATGCTGATCGTTGTAGTGTTACCCAGTTTTCTCCTTCAATTCTTAAATCTGATGGAGTGCCTGTGTATCGCACAGTTCAGCATTCTGGGGAATTTGTTATTACCTTTCCAAGGGCATATCATGCTGGCTTCAATTGTGGCTTTAACTGTGCAGAGGCAGTGAATGTGGCTCCTATTGATTGGTTAATGCATGGACAGAATGCTGTCGAGCTTTACAGTTTACAATGCCGAAAGACATCATTGTCCCATGATAAGCTGTTATTTGGATCAGCACTGGAAGCAGTACGGGCCATTACAGAAATAACCCTTGGAAAGGAAACTCCAAAAAATTTGAAATGGAAAAGTGTCTGTGGGAAAGATGGAGATCTTCCCAAGGCAATTAAGGCAAGGATAAAGATGGAAGAAGAAAGGCTAGATTGTCTTCCAACTCATCTCAAGATTCTCAAGATGAACAGTGACTTTGATTTATACACGGAAAGAGAATGTTTCTCTTGCTTCTATGACTTGCACCTATCTGCTGTGGGTTGTGAGTGCTCTCCTGGCAGATATTCTTGCCTTAAGCATGCTAATTTGTTCTGCTCATGCGGAATGGACAAAAGATTTGTTCTGCTTCGATATACTAGAAATGAACTAAATAATCTGCATGAAGCATTAGAAGGAGAATCACATGCTCTTGAGGTGTGGGCAAATAAAAACTTTGGAATGGTTTCTGCCCATGCTAATGACGTTTGCATACATAAATCAGATGTTGAGAAAGATGTGTACAAAACCAAGAATTGTGAAGAAATGGATAACTTAACTGGCTGTGTAGTAACCAAGGATAGGTCAAATTTAAACACACCTAGTAGTCCTAATAGTCATATTACTTCGGAGGTAGTGCAGTCTGAGTCTCACCGTGTATCTTCTAGTGCAGCACATGACAGCATAGATAGTCATAGTAACAATAATAGTGATAAAAAGCTTGCCACAGACAAGGAAGATAAAATGGATCATGATGGTTATCTGGATTTAAATCTTGATGTCATCTCTGGTGAAACTGAAAATCATGTACTGGATATTGCTGATAACCATCACAATGAAGGTGTTTCAGTAGATGAAAAAGTATGCTGTTCAGAGGCCAAAAAGGAAGAAGACAACATGGATCTTGGTGGTGACAGAAACTTGTCAAACTCGATTTCTGTTCTAAAGACAGATTTCTCGGGTGTTCATAGATTTGATGGTGGAAAAACTGAACTGGATCAGCAATCAGATTCAGGAAAGCTGCACAACAACCTATTTGAAAAAGCAGTCATAGGCACCACAGATACTCTTATAGCTTCGACAGATGAAAGTTGCTTAGTGCGAATGTTTGGTACTTCTGTTGAGCCTGTAAGTTTGGGATCTGTTGTTCATGGAAAGCTGTGGTGCAGTAAACATGCAATATATCCAAAAGGATTCAAGAGCCGAGTTCAGTTCTTTAGCATTCTTGATCCAACGAGAATCTGTAGCTATATTTCTGAAGTCATTGATGCTGGATTTCTTGGACCCCTTTTCAAGGTAACCATGGAAGAATGTCCAAGAGAGGCTTTCACCAATACCTCAGCGGATAATTGCTGGGAATCAGTTCTGGAGAGATTACATCATGAAATCATGAGGCGGAGGAGTCTAGGTGAACTAGAACTCCCTACCTTAGAGCTCCTGAAAAACATTAACGGTCACAGAATGTTTGGCTTCTTTTTACCATCAATTATTCAGGCTATCGAAGTTCAAGATCCCTGTCATATGTGTGTAGAGTACTGGAATCTCAAAGTTGCCCCTTCAGGCAGGATTGTTGATAACTTCACCTATGGTTCCAGAAGCCCTTTAGGTAATATCAATACCAAAATTTTTGGTATCAGTTTGATTAACCATAGCTTCCATGAAGAGATCAAACCAATACTACAAAGCGCAAGTCCTGATGAGTTAAGCACAATGCATAAGTTACTCAGCTCTGATGCACGGTGCTGTGAGTGGAAAGTGACATCGATGGCCCTGATGGATGAGATCCGGAAAGCTTGTCAATGA 3222 0.4084 MLRGRHGIVLQLAFSYKNITSMEQLKLATNSDAKEDNPFGNKSINNNAFESSDSLRKRKISARWDPVGACRPIIEEAPVFYPTIEEFEDTLSYIAKIRPLAESYGICRIVPPACWAPPCPLKEKDLWENAAFPTRIQQIDLLQNREPMRKKSRGRKRKRRRHSRTGTCRKKPANQALNSSESEEKFGFQSGSDFTLKDFQQYANFFKECYFGLKDANVDRTVSESNHQTRWEPSEEEIEGEYWRIIEQPSDEVEVYYGADLETGSLGSGFPKASSITTSDSDQYVLSGWNLNNFPRLPGSVLSYEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKVWYGVPGNHAPALENAMRKYLPDLFEEQPNLLNELFVHFKSSDDEMHADRCSVTQFSPSILKSDGVPVYRTVQHSGEFVITFPRAYHAGFNCGFNCAEAVNVAPIDWLMHGQNAVELYSLQCRKTSLSHDKLLFGSALEAVRAITEITLGKETPKNLKWKSVCGKDGDLPKAIKARIKMEEERLDCLPTHLKILKMNSDFDLYTERECFSCFYDLHLSAVGCECSPGRYSCLKHANLFCSCGMDKRFVLLRYTRNELNNLHEALEGESHALEVWANKNFGMVSAHANDVCIHKSDVEKDVYKTKNCEEMDNLTGCVVTKDRSNLNTPSSPNSHITSEVVQSESHRVSSSAAHDSIDSHSNNNSDKKLATDKEDKMDHDGYLDLNLDVISGETENHVLDIADNHHNEGVSVDEKVCCSEAKKEEDNMDLGGDRNLSNSISVLKTDFSGVHRFDGGKTELDQQSDSGKLHNNLFEKAVIGTTDTLIASTDESCLVRMFGTSVEPVSLGSVVHGKLWCSKHAIYPKGFKSRVQFFSILDPTRICSYISEVIDAGFLGPLFKVTMEECPREAFTNTSADNCWESVLERLHHEIMRRRSLGELELPTLELLKNINGHRMFGFFLPSIIQAIEVQDPCHMCVEYWNLKVAPSGRIVDNFTYGSRSPLGNINTKIFGISLINHSFHEEIKPILQSASPDELSTMHKLLSSDARCCEWKVTSMALMDEIRKACQ 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02735 1073 ProSiteProfiles JmjN domain profile. 77 118 IPR003349 -
Spst9g02735 1073 SMART JmjN_1 76 117 IPR003349 -
Spst9g02735 1073 MobiDBLite consensus disorder prediction 666 720 - -
Spst9g02735 1073 ProSiteProfiles JmjC domain profile. 283 466 IPR003347 -
Spst9g02735 1073 SMART fyrc_3 903 995 IPR003889 GO:0005634
Spst9g02735 1073 MobiDBLite consensus disorder prediction 149 168 - -
Spst9g02735 1073 Gene3D Cupin 62 450 - -
Spst9g02735 1073 Pfam C5HC2 zinc finger 555 607 IPR004198 -
Spst9g02735 1073 MobiDBLite consensus disorder prediction 666 704 - -
Spst9g02735 1073 Pfam JmjC domain, hydroxylase 316 449 IPR003347 -
Spst9g02735 1073 Pfam F/Y rich C-terminus 901 987 IPR003889 GO:0005634
Spst9g02735 1073 Gene3D - 843 983 - -
Spst9g02735 1073 PANTHER LYSINE-SPECIFIC DEMETHYLASE 73 770 - -
Spst9g02735 1073 MobiDBLite consensus disorder prediction 705 720 - -
Spst9g02735 1073 ProSiteProfiles FYR domain FYRN motif profile. 839 897 IPR003888 GO:0005634
Spst9g02735 1073 Pfam jmjN domain 78 111 IPR003349 -
Spst9g02735 1073 SMART cupin_9 283 466 IPR003347 -
Spst9g02735 1073 Pfam F/Y-rich N-terminus 850 894 IPR003888 GO:0005634
Spst9g02735 1073 FunFam Putative lysine-specific demethylase JMJ16 845 983 - -
Spst9g02735 1073 MobiDBLite consensus disorder prediction 143 184 - -
Spst9g02735 1073 SMART fyrn_3 853 897 IPR003888 GO:0005634
Spst9g02735 1073 ProSiteProfiles FYR domain FYRC motif profile. 899 989 IPR003889 GO:0005634
Spst9g02735 1073 SUPERFAMILY Clavaminate synthase-like 284 485 - -
Spst9g02735 1073 MobiDBLite consensus disorder prediction 169 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02735 Spst-Chr9 61588890 61596887 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02735 85 1068 JUMONJI Transcription Factor Family AT4G20400 45.954 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Spst9g02735 JmjC 6.1e-40 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02735 K11446 - gmx:100801775 1710.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02735 9 61588890 61596887 Spst9g02735 9 61588890 61596887 ECH