Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02687 ATGACGTCACGGTCGGGGAACGGAACCAGTGGGGGTGGGAGCAGCAGCAGGACCCGTGTGGGGAAATACGAGTTGGGTCGGACCCTTGGCGAGGGCAATTTTGCGAAGGTAAAGTTCGCGAAGCACGTAGAAAGCAGAGAGAACGTCGCCATCAAAATTCTCGACAAGGAGAAACTTCTCAAGCACAAAATGATTGCCCAGCTTATTTCGGGAATAAAACGAGAAATATCAACAATGAAACTTATAAGACACCCAAATGTCATACGTATGTACGAGGTAATGGCTAGCAAAACAAAGATATACATTGTATTGGAATTTGTGACTGGTGGAGAGCTGTTTGACAAAATTGTAAGACAGTTTTTATCTTTCCCCGTGCTTCTGAAGGCACGCAGCGGGAGGTTGAAAGAAGATGAAGCAAGAAAATATTTTCAACAGCTTATATGTGCTGTAGATTACTGCCATAGTAGAGGTGTTTTTCATAGAGACCTGAAGCCTGAGAATTTGTTGCTGGATGCTAATGGAGTGCTTAAAGTATCAGATTTTGGATTGAGTGCATTGCCTCAACAAGTTCGGGAAGATGGGCTACTTCACACAACATGCGGTACGCCAAATTATGTTGCTCCAGAGGTGATTCACAACAAAGGTTATGATGGTGCCAAGGCAGATCTATGGTCATGTGGTGTTATTCTCTTTGTGTTAATGGCAGGCTATTTGCCCTTTGAAGAAACCAATCTAACAGCTTTATATAAAAAGTGCTACTATGTTTTTACAATCCTGCGGAGAGGGAGTTATCTTGCTGTGGAAATTACTAAGTTGAAGCCTGATATTTACAAGGCTGAGTTCACGTGTCCTCCATGGTTCTCTTCAAGTGCAAAGAAACTAATCAACAAAATACTTGATCCCAATCCTGCCACTAGGATTACAATTGCTGAGGTAGTTGAGAATGACTGGTTCAAGAAGGGTTATAAGCCTCCCGTATTTGAACAGGCCAGTGTTAGTCTTGATGATGTAAATTCTATTTTCAGCGAATCTACGGATTCACAAAATCTTGTCGTTGAGAGGCGTGAAGAGGGGCATGTGGCACCAGTGACCATGAATGCCTTTGAGCTTATATCTAAATCTCAAGGCCTCAACCTTAGTAGTCTATTTGAGAAGCAAATGGGACTTGTTAAAAGGGAGACGCGATTCACATCCAAATGTTCAGCGGATGAAATAATTTCAAATATTGAGAAAGCTGCAGGACCCCTGGGTTTTGATGTTAAGAAGAACAACTGTAAGTTAAAGATTCAAGGGGAAAAGACTGGACGGAAAGGTCATCTATCTGTAGCTACCGAGATATTAGAGGTGGCTCCTTCGCTTTACATGGTTGAGCTACGTAAGTCTGAAGGAGATACTTTGGAATTTCACAAATTCTACAAGAATCTTGCTACTGGGCTGAAAGATATTGTTTGGAAAGCGGAACCTATCGGTGAAGATAAGAAAGATGGTCCCAATCCATCAAAATAA 1506 0.421 MTSRSGNGTSGGGSSSRTRVGKYELGRTLGEGNFAKVKFAKHVESRENVAIKILDKEKLLKHKMIAQLISGIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIVRQFLSFPVLLKARSGRLKEDEARKYFQQLICAVDYCHSRGVFHRDLKPENLLLDANGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVIHNKGYDGAKADLWSCGVILFVLMAGYLPFEETNLTALYKKCYYVFTILRRGSYLAVEITKLKPDIYKAEFTCPPWFSSSAKKLINKILDPNPATRITIAEVVENDWFKKGYKPPVFEQASVSLDDVNSIFSESTDSQNLVVERREEGHVAPVTMNAFELISKSQGLNLSSLFEKQMGLVKRETRFTSKCSADEIISNIEKAAGPLGFDVKKNNCKLKIQGEKTGRKGHLSVATEILEVAPSLYMVELRKSEGDTLEFHKFYKNLATGLKDIVWKAEPIGEDKKDGPNPSK 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02687 501 Pfam NAF domain 362 422 IPR004041 GO:0007165
Spst9g02687 501 ProSiteProfiles Protein kinase domain profile. 23 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02687 501 Gene3D Transferase(Phosphotransferase) domain 1 122 325 - -
Spst9g02687 501 FunFam Non-specific serine/threonine protein kinase 359 485 - -
Spst9g02687 501 FunFam Non-specific serine/threonine protein kinase 14 106 - -
Spst9g02687 501 ProSiteProfiles NAF domain profile. 360 384 IPR018451 GO:0007165
Spst9g02687 501 SMART serkin_6 23 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02687 501 FunFam Non-specific serine/threonine protein kinase 16 258 - -
Spst9g02687 501 Gene3D Phosphorylase Kinase; domain 1 12 106 - -
Spst9g02687 501 CDD CIPK_C 366 481 - -
Spst9g02687 501 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Spst9g02687 501 Pfam Protein kinase domain 23 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02687 501 Gene3D Kinase associated domain 1, KA1 360 485 - -
Spst9g02687 501 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 18 470 - -
Spst9g02687 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Spst9g02687 501 SUPERFAMILY Protein kinase-like (PK-like) 20 348 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02687 Spst-Chr9 60945270 60954078 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02687 15 494 CBL-interacting serine-threonine protein kinases AT1G01140 63.169 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst9g02687 Pkinase 2.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02687 - - gmx:100788746 829.32