Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02679 ATGTTGAAGGAGAAGGGAGGGAGCCGCCCACCGTGGGTGGGGCTAGGCGCCGCCGTGTGGGTTCAGATCGCGTCGGGGACCACTGCCACCTTCCCTCTTTACTCTCACGCCTTGAAATCAGTGCTGGGCTTTGATCAGCGCCACATCACGCTCCTCGGTGTGGCTAACGACATCGGCGAAAACCTCAGCCTCCTCCCCGGCATCGCCTGCAACAAGTTCCCCCCTTGGCTCCTCGTCGTCGTTGGTTCCCTCGCCGCCTTCCTCGGCTACGGCGTCATCTTCCTTGCTGTCTCCCAGATCCTCCCCTCCCTCCATTTCTTACTGCTATGGTTGGCTCTACTTGTTGCCGCCAACAGTTCTGCGTGGTTGACCACTTCGGTTGTGGTGACCAACATGAGAAACTTCCCTGCTAGCAGAGGCTCCGTCGCTGGGGTTCTGAAAGGTTATGGGGGGATTAGTGGTGCAGTTTGGACCGAGATTTACAGCATTCTGCTTCATAACAATTCTTCAACGTTCCTGTTGTTTCTTGCTGTTGGTGTTCCTGTTATCTGCTTCAGCATGATGTTTCTCGTTAGGCCCTGTACCCCGGCAACAGGTGATGACCCTGCGGAGCATTACCATTTTCTGTTTGTCCAAGGTTCCAGTGTGATCATGGGTGTTTACCTTCTTGTTAGTACCATACTTGGTAATGTTTCTCCCTTTAGTGATGCTGTTTCATATGCTTTGGTGACTGTGATGGTTCTGCTTCTCATGGCTCCACTTGCTGTCCCTTTGAAGATGACATTGTTTCCAAGGAATGGTTCTAAATCAGAGTCACCAGAGCAATCAGTTGGACCCTCTGAGTCTCTGACTCACGGGAAAGATGAGAGTGCAGAGCCGCTGCTGGCGTCTTCATCGGCAGGGGCACTGGGGAGTTTTAATGATGAGGATGATTCATCTGAGGTTGCGGAGCTTCTTGCTTTGGGTGAGGGGGCTGTGAAGCAGAAGAAGAGAAGGCCTAAACGTGGAGAAGATTTTAAGTTAAGTGAGGCTATAGTGAAGGCAGATTTCTGGCTGCTGTTTTTAGTCTTCTTTGTTGGCATTGGCACTGGGGTAACTGTTCTCAATAATCTGGCCCAAATAGGTATTGCCCAAGGGGAGGAAGACACCACTACCCTGCTGTCAATTTTCAGTTTTTGCAATTTTTTGGGGCGGCTTGGTGGAGGAGTTGTATCAGAACATTTTGTCAGGACAAGAACACTCCCAAGGACTATCTGGATGACGTTCACGCAGATAATTATGCTCATTGTATACCTTCTGTTTGCCTATGCTATCAATGGAACCCTTTACCCTGCAGTTGCATTTCTTGGTGTCTGTTTTGGTGTGCAAGTTTCTGCGATGGTCCCTACCGTTTCTGAGGTTTTCGGTCTGAAGCACTTCGGAGTTCTGAGCAGCATCATGTCGTTGGGGAATCCAATTGGTGCATTCCTCTTTTCGGTTCTGCTAGCAGGGAACATATATGACAATGAGGCAGCAAAGCAGCATGTCATCCTTCCTGATTCAGCTGCTTCTTGCCTCGGTCCAAATTGCTTTAAGCTTACCTTTCTCATTCTTGCTGGGGTGTGTGGTGCTGGCATCATCTTGAGCGTTATCCTGACTTTGAGAATTAAGCCTGTTTACCGAATGCTTTATGCTGGAGGCTCTTTCAGGCTGCCTCAGACATCTGCAAGTCACTAA 1716 0.4988 MLKEKGGSRPPWVGLGAAVWVQIASGTTATFPLYSHALKSVLGFDQRHITLLGVANDIGENLSLLPGIACNKFPPWLLVVVGSLAAFLGYGVIFLAVSQILPSLHFLLLWLALLVAANSSAWLTTSVVVTNMRNFPASRGSVAGVLKGYGGISGAVWTEIYSILLHNNSSTFLLFLAVGVPVICFSMMFLVRPCTPATGDDPAEHYHFLFVQGSSVIMGVYLLVSTILGNVSPFSDAVSYALVTVMVLLLMAPLAVPLKMTLFPRNGSKSESPEQSVGPSESLTHGKDESAEPLLASSSAGALGSFNDEDDSSEVAELLALGEGAVKQKKRRPKRGEDFKLSEAIVKADFWLLFLVFFVGIGTGVTVLNNLAQIGIAQGEEDTTTLLSIFSFCNFLGRLGGGVVSEHFVRTRTLPRTIWMTFTQIIMLIVYLLFAYAINGTLYPAVAFLGVCFGVQVSAMVPTVSEVFGLKHFGVLSSIMSLGNPIGAFLFSVLLAGNIYDNEAAKQHVILPDSAASCLGPNCFKLTFLILAGVCGAGIILSVILTLRIKPVYRMLYAGGSFRLPQTSASH 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02679 571 MobiDBLite consensus disorder prediction 267 290 - -
Spst9g02679 571 SUPERFAMILY MFS general substrate transporter 13 196 IPR036259 -
Spst9g02679 571 CDD MFS_Mch1p_like 10 539 - -
Spst9g02679 571 SUPERFAMILY MFS general substrate transporter 223 551 IPR036259 -
Spst9g02679 571 MobiDBLite consensus disorder prediction 267 283 - -
Spst9g02679 571 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 554 - -
Spst9g02679 571 Gene3D MFS general substrate transporter like domains 206 548 IPR036259 -
Spst9g02679 571 Pfam Nodulin-like 11 258 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02679 Spst-Chr9 60863926 60866918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02679 2 571 Nodulin-like Gene Family AT1G80530 55.166 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02679 - - gmx:100794012 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02679 9 60863926 60866918 Spst9g02679 9 60863926 60866918 ECH
Spst3g05025 3 102052448 102054954 Spst9g02679 9 60863926 60866918 PCT