Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02658 ATGCCAATCACGGAGAACCTCTCCTACCCCACGATTGCTGGTGCCACCATGTGTATACAGGACGCTGAGAAAGATATGGATAATAGCTCAACAAATTCATGGCCTTTGCATTGTCACCTTTTGCTCACCACCCACATGGACAAAAAAGGATCTTTTCTCAGACCTTCATCAACTGATGACACCACCAATATCACTGTTCGAAGTTCCTATCCTCTGGAAAGCATTTCTGAGGACGCGGTGATTGCAGACATGAAACAGAACCAGATGAGTTTAGCCCCGGCTCTTCGGTCTGGAGTTTGGTCTGACATTGGTGAACGCCCTTACATGGAAGACACTCACATATGCATTGGAGACTTGGCAAATAAATTTAACTATAATGCACTTTCTGGGGATGCTGTTTCCTTTTATGGTGTATTTGATGGGCATGGAGGGAAGAGTGCTGCACAATTTGTACGTGATAATCTGCCAAGAGTTATTGTTGAGGATGTGAACTTTCCTTTGGAGCTTGAGAAGGTGGTCAAAAGGTCATTTTTGGAGACTGATGCTGCATTTCTAAAATCATCCTCTGAAGAGCCTTCCCTTTCTTCTGGTACAACTGCTTTGACTGCAATTATATTTGGAAGGTCATTACTTGTAGCAAATGTGGGAGATTGCCGAGCTGTCTTGTCCCGTCATGGAAGAGCCATAGAAATGTCTAAAGATCATAGGCCAAACTGTGCCAATGAAAGGACGCGGGTTGAGTCCCTAGGTGGCTTCATTGACGATGGTTACCTGAATGGTCAGTTAGGTGTCACTCGTGCCATTGGAGACTGGCACCTTGAAGGAATGAAGGAAATGAGTGAAAGAGGAGGACCACTGAGTGCTGAACCTGAACTTAAACTGATGACACTGACCAAAGAAGATGAATTCTTGTTAATTGCTAGTGATGGTATATGGGATGTTTTTAGTAGCCAAAATGCTGTGGATTTTGCTAGAAGGAGGCTTCAAGAACACAATGATGAGAAACTATGCTGCAAGGAAATAGTGCAGGAAGCAATGAAGAGAGCATCAACAGATAACCTGACAGTTGTGATGGTATGTTTTAACTCAGATCCTCCACCACCTGTGCTTGTGGAAAGAACACGAGTAAGAAGAAGCATATCTGCAGAAGGACTTCAGAATCTTAAATGCCTGCTAAAAGAATAA 1185 0.4354 MPITENLSYPTIAGATMCIQDAEKDMDNSSTNSWPLHCHLLLTTHMDKKGSFLRPSSTDDTTNITVRSSYPLESISEDAVIADMKQNQMSLAPALRSGVWSDIGERPYMEDTHICIGDLANKFNYNALSGDAVSFYGVFDGHGGKSAAQFVRDNLPRVIVEDVNFPLELEKVVKRSFLETDAAFLKSSSEEPSLSSGTTALTAIIFGRSLLVANVGDCRAVLSRHGRAIEMSKDHRPNCANERTRVESLGGFIDDGYLNGQLGVTRAIGDWHLEGMKEMSERGGPLSAEPELKLMTLTKEDEFLLIASDGIWDVFSSQNAVDFARRRLQEHNDEKLCCKEIVQEAMKRASTDNLTVVMVCFNSDPPPPVLVERTRVRRSISAEGLQNLKCLLKE 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02658 394 CDD PP2Cc 96 361 IPR001932 -
Spst9g02658 394 ProSitePatterns PPM-type phosphatase domain signature. 135 143 IPR000222 GO:0043169
Spst9g02658 394 Pfam Protein phosphatase 2C 108 353 IPR001932 -
Spst9g02658 394 SMART PP2C_SIG_2 111 361 IPR001932 -
Spst9g02658 394 SUPERFAMILY PP2C-like 88 363 IPR036457 -
Spst9g02658 394 Gene3D - 79 364 IPR036457 -
Spst9g02658 394 SMART PP2C_4 86 359 IPR001932 -
Spst9g02658 394 PANTHER PROTEIN PHOSPHATASE 2C 83 359 IPR015655 GO:0004722|GO:0006470
Spst9g02658 394 FunFam Probable protein phosphatase 2C 22 81 364 - -
Spst9g02658 394 ProSiteProfiles PPM-type phosphatase domain profile. 96 361 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02658 Spst-Chr9 60648306 60653744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02658 66 392 PP2C-type Phosphatase Gene Family AT2G25620 55.120 1.89e-130 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Spst9g02658 PP2C 3.3e-69 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02658 K14803 - gmx:100813157 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02658 9 60648306 60653744 Spst9g02658 9 60648306 60653744 ECH