Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02647 ATGATTGTCTTTGGGTCAAGAAACCATACTGATCATTTGGCACTACTCAAATTCAAAGAATCCATATCCAGTGATCCATATGGAGTTTTACTATCTTGGAATACTTCTTCTCACTTTTGTAATTGGAATGGAATCACATGCAATTCCATGCATAAAAGAGTTACAAAGTTGGATTTGCAGGGGTACAAGTTGAAGGGATCCATATCTCCTCACCTAGGAAATCTCTCTTACATGAGAATCTTGCTCCTTGACAACAACTACCTGCATGGGAACATCCCACAACAATTGGGAAAATTGTCACAACTCCAGGAACTCTCTCTCGGAAACAACTCATTGGTAGGTAAACTTCCTACAAACTTGACAGGTTGCACTAATCTCAAAATCATATACTTATTTGGGAACAATCTGATTGGAAGAATACCTATTGAAATTAGCTCCCTTCGTAAGCTTCAAAATTTGAATGTTGGGAACAATAAGTTAACAGGAGGAATCCCATCGTTCCTAGGAAATCTTTCTGTCCTAGTTCGTCTCTCACTGGGTATTAATAACTTAGAGGGAGAAGTTCCACATGAATTGTGTCACCTAAAACACTTGTTAAGGATATTTGTACCTGTCAACAAACTGATTGGAGCTTTTCCTTCTTGTTTTTATAATATGTCATCGCTTATTGTAATCTCAGCTACAGAAAATCAATTTAATGGATCTCTTCCACCAAACATGTTCCACAACCTTCCCAATCTCCAACAATTTTATATTGCTCTAAATCAGGTCTCAGGTTCAATCCCACCTTCCATCACAAATGCATCTATCCTTCAATTACTTGAGATAGGTGCAAATCAATTCACTGGACAAGTTCCAGCTCTTGGGATGCTAAAAGATCTTTTTTACCTAGGTTTGTCTCTAAACAATCTTGGTGATAATTCAACTGATGATTTGAAGTTTTTTAAATCATTGACAAACTGTAGTAGTTTGCAAATGTTAGATATATCTTACAATAATTTTGGAGGTCAATTGCCAAATTCTTTGGCCAATTTGTCCACCCGACTCAACCAGCTGTATCTTGGACGTAATCAGATATCTGGAGAAATTCCTACAGCAATGGGAAATCTAATTGGCTTGACTCAATTGATGATGGGAGATAACCTCATTGGCGGGATTATTCCATCAAGTTTTGGAAAGTTTCAGAAAATGCAGGAGTTAGAGTTAAGAGCAAACCAACTTTCAGGACATATGGGAGATTTTGTTGGCAATCTTAGTCAATTGTTTTATTTGGACATGGGAAGAAATATGTTAGAAGGAAATATACCTTCCACTATAGGGAATTGCCAAAAGTTACAACATCTAAATCTTGCACAAAACAAATTTACCGGAACTGTACCTTTAGAGATCTTTAATCTTTCCTCTCTATCAAACTTGTTGACTTTGTCACAAAACTCATTGAGTGGCAATATACCAGAAGAAGTGGGAAAATTAAAAAATATTGATTTTCTAGATGTGTCTGAGAATAATCTTTCTGGTCACATTCCTGGAACTATTGGAGAATGCATAACATTGGAATACCTCTATTTGCAAGGAAATTCTTTGCAGGGAATCATACCATCCTCTTTGGCATCACTCAAAGGTCTTCAAAGTTTAGACCTGTCACGAAACAACTTATCTGGATCAATTCCAAATGATCTGCAGAATCTTTCTTTCTTGAATTATGTCAATGTATCTTTCAACATGTTGGATGGTGAGGTGCCAACTGAAGGTGTGTTTCAAAACGCAAGTGCCTTTGATGTTAGTGGAAATAGTAACGTTTGTGGAGATGTTTCCAAACTGCATCTACCTCCATGCCCTGTCAAAGGTAAGAAACTTGCAAAACACCACAAGTTCAGGTTGATTGCAGTGATAGTTAGTGTGGTTGGTTTTCTTCTCATATTGTCAATTATTTCAACTATCTACCGGATGAGAAAAAAGAATAAGAAATCATCTTTGGAATCACCAAAAATGGACCAGCTAGCTAAAGTTTCATATCAAAGCCTATATAATGGAACTGATGGATTCTCAGCAACAAATTTGATTGGCTCTGGAAATTTTAGCTCTGTCTATAAAGGAAATCTTGAATCAGAAGACAAAGTTGTTGCTATAAAGGTCCTAAACCTTCAACAAAAAGGAGCCCACAAGAGTTTCATAGTTGAATGCAACGCACTTAAAAGTATTAGACATCGAAATCTGGTTCAGATTTTAACATGTTGTTCCAGCACAGATTACAAAGGTCAAGAATTTAAAGCTTTGATTTTTGAGTACATGAAGAACGGAAGCTTAGAACAATGGCTGCATCCAACGACGCTTGGTCCTGAACAACATCCGAGATCATTAAGCTTTGGGCAAAGACTAAATATCATCATTGATGTTGCTTCTGCAATACATTATCTTCATCATGAATGTGAGCAACCGATTATTCATGGTGATTTAAAGCCAAGCAATGTCCTTCTTGACGATGATATGATTGCTCACGTGTCTGATTTTGGCATAGCAAGATTTCTCTCAGCTATTAATGATACCACTTCTAAGGAAACGAGTACAATTGGGTTCAAGGGGACTATTGGCTATGCTCCCCCAGAGTATGGAATGGGTTCTGAGGTGTCTATGAATGGTGACATGTACAGTTTTGGGATCCTTTTGTTGGAAATGTTTACTGGAAGAAGACCCACTGATGAAATCTATGAAGATGGTCAAAATTTACATGACTTTGTGAAAAATGCAGTGTTTGATAATCTTTTACAAACTTTGGACCCATCACTTGAACTAGAACACAAAGTAGCAACAATAGAAAAAGAGAACGGTCAAAATCTTACTGCAGATGTGGAAAACTACTTAGTTTCACTCTTTAAGATTGGACTTGTTTGCTCAATGGAATCACCCAGAGAAAGAATGAATATTATGGAGGTCTCTAAAGAACTAAGCAAAATCAGAAAAGCATGCTTAAAAAACTTAGGGTTGGTGGTTGCCACGCCTTGCGCCACCGCAGTAAATCTTGGCATCATGGCCTCCGGCGCCGCGGCAGACGGGCTCTTCCGACCGATCTACGAGGGCTGCATCACCGCCTACAACAACGACGTCGAGCGCCGCCCTTACCATCGCAACTGCGGCTGTGCGCTCCACAGCAAGTCGCGCCGCGGCAGAGCGTGCTCGCACAGGATGCCGCGCTGCAACAGCGTCTCCTATCCCATGAGGCGGGCCTGGAGCGAAGGGAGCTTGGTCATGGCCACCTCGGCGCACTCCTCTCCCTCTTCCTCCCCCGCCGGACCCAGGCCTCAACACGACGACGAGGGACATAGTCACAAATTAGAGGTTTTATTTGAGATTTCAGAATTTGCGCGATATGAATCTGATTTGGGAATGTGGGAGCTGGAAACACAGGAGTCACAGCTAATTCATTTCTCTTTCCAGAACTTCAGGAAGCTTTTTTATGAAAAAGACTAA 3468 0.3971 MIVFGSRNHTDHLALLKFKESISSDPYGVLLSWNTSSHFCNWNGITCNSMHKRVTKLDLQGYKLKGSISPHLGNLSYMRILLLDNNYLHGNIPQQLGKLSQLQELSLGNNSLVGKLPTNLTGCTNLKIIYLFGNNLIGRIPIEISSLRKLQNLNVGNNKLTGGIPSFLGNLSVLVRLSLGINNLEGEVPHELCHLKHLLRIFVPVNKLIGAFPSCFYNMSSLIVISATENQFNGSLPPNMFHNLPNLQQFYIALNQVSGSIPPSITNASILQLLEIGANQFTGQVPALGMLKDLFYLGLSLNNLGDNSTDDLKFFKSLTNCSSLQMLDISYNNFGGQLPNSLANLSTRLNQLYLGRNQISGEIPTAMGNLIGLTQLMMGDNLIGGIIPSSFGKFQKMQELELRANQLSGHMGDFVGNLSQLFYLDMGRNMLEGNIPSTIGNCQKLQHLNLAQNKFTGTVPLEIFNLSSLSNLLTLSQNSLSGNIPEEVGKLKNIDFLDVSENNLSGHIPGTIGECITLEYLYLQGNSLQGIIPSSLASLKGLQSLDLSRNNLSGSIPNDLQNLSFLNYVNVSFNMLDGEVPTEGVFQNASAFDVSGNSNVCGDVSKLHLPPCPVKGKKLAKHHKFRLIAVIVSVVGFLLILSIISTIYRMRKKNKKSSLESPKMDQLAKVSYQSLYNGTDGFSATNLIGSGNFSSVYKGNLESEDKVVAIKVLNLQQKGAHKSFIVECNALKSIRHRNLVQILTCCSSTDYKGQEFKALIFEYMKNGSLEQWLHPTTLGPEQHPRSLSFGQRLNIIIDVASAIHYLHHECEQPIIHGDLKPSNVLLDDDMIAHVSDFGIARFLSAINDTTSKETSTIGFKGTIGYAPPEYGMGSEVSMNGDMYSFGILLLEMFTGRRPTDEIYEDGQNLHDFVKNAVFDNLLQTLDPSLELEHKVATIEKENGQNLTADVENYLVSLFKIGLVCSMESPRERMNIMEVSKELSKIRKACLKNLGLVVATPCATAVNLGIMASGAAADGLFRPIYEGCITAYNNDVERRPYHRNCGCALHSKSRRGRACSHRMPRCNSVSYPMRRAWSEGSLVMATSAHSSPSSSPAGPRPQHDDEGHSHKLEVLFEISEFARYESDLGMWELETQESQLIHFSFQNFRKLFYEKD 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02647 1155 FunFam LRR receptor-like serine/threonine-protein kinase EFR 314 618 - -
Spst9g02647 1155 PANTHER LEUCINE RICH REPEAT KINASE 2 316 986 - -
Spst9g02647 1155 Gene3D Phosphorylase Kinase; domain 1 663 763 - -
Spst9g02647 1155 Pfam Leucine rich repeat 517 576 IPR001611 GO:0005515
Spst9g02647 1155 SUPERFAMILY L domain-like 9 304 - -
Spst9g02647 1155 ProSitePatterns Protein kinases ATP-binding region signature. 688 711 IPR017441 GO:0005524
Spst9g02647 1155 FunFam LRR receptor-like serine/threonine-protein kinase EFR 652 763 - -
Spst9g02647 1155 Pfam Leucine rich repeat N-terminal domain 10 48 IPR013210 -
Spst9g02647 1155 SMART LRR_typ_2 418 442 IPR003591 -
Spst9g02647 1155 SMART LRR_typ_2 219 243 IPR003591 -
Spst9g02647 1155 SMART LRR_typ_2 99 123 IPR003591 -
Spst9g02647 1155 SMART LRR_typ_2 147 171 IPR003591 -
Spst9g02647 1155 SMART LRR_typ_2 370 393 IPR003591 -
Spst9g02647 1155 SMART LRR_typ_2 539 562 IPR003591 -
Spst9g02647 1155 SMART LRR_typ_2 491 515 IPR003591 -
Spst9g02647 1155 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Spst9g02647 1155 Gene3D Ribonuclease Inhibitor 206 310 IPR032675 -
Spst9g02647 1155 ProSiteProfiles Protein kinase domain profile. 682 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02647 1155 Gene3D Ribonuclease Inhibitor 10 120 IPR032675 -
Spst9g02647 1155 SUPERFAMILY Protein kinase-like (PK-like) 656 982 IPR011009 -
Spst9g02647 1155 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 47 313 - -
Spst9g02647 1155 ProSiteProfiles Leucine-rich repeat profile. 541 564 IPR001611 GO:0005515
Spst9g02647 1155 SUPERFAMILY L domain-like 347 602 - -
Spst9g02647 1155 SMART serkin_6 682 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02647 1155 Pfam Leucine Rich Repeat 323 345 IPR001611 GO:0005515
Spst9g02647 1155 Gene3D Ribonuclease Inhibitor 311 620 IPR032675 -
Spst9g02647 1155 Gene3D Ribonuclease Inhibitor 121 203 IPR032675 -
Spst9g02647 1155 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 764 994 - -
Spst9g02647 1155 MobiDBLite consensus disorder prediction 1085 1106 - -
Spst9g02647 1155 Gene3D Transferase(Phosphotransferase) domain 1 764 994 - -
Spst9g02647 1155 Pfam Protein kinase domain 685 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02647 Spst-Chr9 60560077 60568789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02647 5 991 Receptor kinase-like Gene Family AT3G47570 44.534 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Spst9g02647 Pkinase 1.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02647 - - gmx:100782685 1472.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g05049 3 102239237 102239500 Spst9g02647 9 60560077 60568789 PCT