Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02621 ATGGGTGAGAAAAGCAACAGCGGCGACGCGATTAACTCCACTCTGCTCCACGGGAAGTACGAGCTGGGGCGGCTACTGGGGCACGGGACGTTCGCCAAGGTCTACCATGCGCGGAACCTGAAGAGCGGGAAGAGCGTGGCGATGAAGGTGGTGGGGAAGGAGAAAGTGATGAAGGTGGGGATGATGGAGCAGACCAAGAGGGAGATCTCGGCCATGAACATGGTGAAGCACCCCAACATCGTGCAACTCCACGAGGTCATGGCCAGCAAGTCCAAGATCTACATCGCCATGGAGCTCGTGCGCGGCGGCGAGCTCTTCAACAAGATCGCCCGCGGCCGTCTCAGGGAGGAGACGGCGCGCCTTTACTTTCAGCAGCTTGTCTCCGCGATTGACTTCTGCCACAGCCGCGGCGTCTACCACCGCGACCTCAAGCCGGAGAACCTCCTCCTAGACGAGGACGGCAGCCTCAAGGTCACCGACTTCGGCCTCAGCACCTTCTCCGAGCACCTCCGCCAGGACGGCCTGCTTCACACCACGTGCGGCACGCCGGCCTACGTGGCGCCGGAAGTCATCGGGAAAAAGGCTACGACGGCGCCAAGGCTGACATCTGGTCTTGCGGATGACAACTTGGTCGCCTTGTATAAGAAAATCTACCGCGGTGACTTCAAGTGTCCGCCGTGGTTTTCATCCGAGGCGCGCCGACTCATAACGAAGCTCCTCGACCCGAACCCGAATACCAGAATAACGATTTCCAAGATCATGGACACGTCCTGGTTTAAGAAACCGGTTCCGAAGAACATGATGGGAGTGAAGAGAGAGGAGATGGATTTGGAGGAGAAGATTAAGCAGCAGGAAGAGTGTAAGTCCACAACGATGAATGCTTTTCATATAATTTCGCTTTCGGAGGGGTTCAATCTGTCGCCGTTGTTCGAGGAGAAGAAGAAGGAGGAGAAGGAGATCCGATTCGCAACCACGCGCCCCGCGAGTAGCGTGATTTCGCGGCTGGAGGAGGTGGCGAAGGCGGTGAAGTTTGACGTGAAGAAGAGTGAGACGAAAGTGAGGTTGCAGGGTCAAGAGCGGGGACGGAAAGGGAAGCTAGCAATTGCTGCGGATTTATACGCCGTAACGCCGTCGTTTTTGGTTGTGGAGGTTAAGAAGGACAACGGTGACACCTTGGAGTACAACCAATTCTGCAGCAACGAACTTCGTCCCGCGCTTAAAGACATCGTGTGGAGGACTTCCCCTCCTGAAAATCGGACGCCTGCTTGA 1269 0.5658 MGEKSNSGDAINSTLLHGKYELGRLLGHGTFAKVYHARNLKSGKSVAMKVVGKEKVMKVGMMEQTKREISAMNMVKHPNIVQLHEVMASKSKIYIAMELVRGGELFNKIARGRLREETARLYFQQLVSAIDFCHSRGVYHRDLKPENLLLDEDGSLKVTDFGLSTFSEHLRQDGLLHTTCGTPAYVAPEVIGKKATTAPRLTSGLADDNLVALYKKIYRGDFKCPPWFSSEARRLITKLLDPNPNTRITISKIMDTSWFKKPVPKNMMGVKREEMDLEEKIKQQEECKSTTMNAFHIISLSEGFNLSPLFEEKKKEEKEIRFATTRPASSVISRLEEVAKAVKFDVKKSETKVRLQGQERGRKGKLAIAADLYAVTPSFLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWRTSPPENRTPA 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02621 422 Gene3D Transferase(Phosphotransferase) domain 1 107 201 - -
Spst9g02621 422 Pfam Protein kinase domain 20 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02621 422 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 408 - -
Spst9g02621 422 Pfam NAF domain 290 348 IPR004041 GO:0007165
Spst9g02621 422 ProSiteProfiles Protein kinase domain profile. 20 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02621 422 Gene3D Transferase(Phosphotransferase) domain 1 202 290 - -
Spst9g02621 422 FunFam Non-specific serine/threonine protein kinase 11 99 - -
Spst9g02621 422 FunFam Non-specific serine/threonine protein kinase 287 411 - -
Spst9g02621 422 SMART serkin_6 20 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02621 422 CDD CIPK_C 293 407 - -
Spst9g02621 422 SUPERFAMILY Protein kinase-like (PK-like) 17 267 IPR011009 -
Spst9g02621 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Spst9g02621 422 ProSitePatterns Protein kinases ATP-binding region signature. 26 53 IPR017441 GO:0005524
Spst9g02621 422 Gene3D Kinase associated domain 1, KA1 291 412 - -
Spst9g02621 422 FunFam Maternal embryonic leucine zipper kinase 12 268 - -
Spst9g02621 422 Gene3D Phosphorylase Kinase; domain 1 13 106 - -
Spst9g02621 422 ProSiteProfiles NAF domain profile. 287 311 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02621 Spst-Chr9 60251437 60252749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02621 6 415 CBL-interacting serine-threonine protein kinases AT4G30960 68.349 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst9g02621 Pkinase 1.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02621 - K07198 gmx:547644 730.709