Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02596 ATGCCAAAAGAGTTCTACTCGGATGGCAAAAAGCATAAAAAACCGCTGTGGGGAGCAACTGAGCCTCCAGCGCTTAAACCTAGCAATTTGCTACCGTTGGGGAAAAATAGAATTGCTGAAACATTCAGAATTGGAGGATCGAAGGTATTCCCGGAGGACCACGAGCCGTGGCGTAAAAGAATACTTGACCCTGGTAGTGAGATTGTGTTGAAATGGAACCGGGTGTTCATAGTTTCATGCTTGGTGGCTCTTTTTGTTGATCCATTGTACTTTTATTTGCCAAGTGTGATAGAAAGCACAGAGTCTTCATGTGTGAGGACTGACCTAACATTGCGCATTGTTGTGACCTTTCTGCGCACTATTGCGGACCTTTTTTATCTGTTGCACCTGATAATTAAGTTCAGAACAGCATATGTGGCACCGAGCTCACGGGTATTTGGCAGGGGGGAACTTGTCATGGACCCTAAGAAGATTGCAAGGAGATATGTCAGATCTGATTTCTTCATTGATTTTATTGCCACACTCCCTCTACCTCAGATGGTCATCTGGTTTATTATCCCAGCAACAAGAAGCCCTCAAACTGATCACAAGAATAATGCACTTGCATTGATTGTTTTGCTCCAATATGTTCCAAGATTATATTTGATTTTTCCATTAAGTTCTCAAATAATCAAAGCAACAGGAGTGGTTACGAAGACTGCTTGGGCGGGGGCTGCATATAACTTGCTGCTGTACATGTTAGCTAGCCATGTTCTAGGGGCATCTTGGTATCTTCTATCTGTGGACCGATACACTACTTGTTGGAAATTCTTTTGCAAAAAGGAACAAAATCCTGAAAATTGCTTTGGTTACCTGGACTGCAGTTCTTTGAATGTTAAGCTGCGCAGGATATGGGCAAATAGTACAAGTGTGTTTAGCAGCTGTGATCCCAGTAATAAAGATATTAATTTCAAGTTTGGAATATTTGAAAATGCCGTAAAGAAACATGTTGTTTCTTCAAATTTCATTCCAAAATACCTTTATTGTTTATGGTGGGGATTGCAGCAATTAAGTTCTTATGGGCAGAACCTAGAAACTAGCACATTTATTGGAGAAACATCATTTGCAATTGTCATTGCCATCTTAGGTCTTGTATTATTTTCCCATTTGATTGGGAACATGCAGACATATTTGCAATCTATTACTATAAGGCTTGAGGAATGGAGGCTTAAGCGAAGAGACACAGAGGAGTGGATGAGGCATCGCCAACTCCCTGAAGATTTGAGAAGTCGTGTCAGACGATTTGTTCAATATAAATGGCTTGCTACTCGTGGAGTTGATGAGGAAACCATTCTATGTGCATTACCTGCTGATCTTCGTCGTGATATTCAACGCCACTTGTGCTTAGACCTTGTTAGAAGAGTTCCCTTCTTCTCACAGATGGATGATCAGCTTCTAGATGCAATATGTGAGCGGCTGGTATCGTCTCTGAGCACTCAAGATACCTATATTGTTCGTGAGGGTGACCCCGTGACTGAAATGCTTTTTATCATTAGAGGTAGACTGGATAGTTCTACTACAAATGGTGGCCGGACCGGTTTCTTCAACTCAATCATATTGAGACCTGGAGATTTTTGTGGCGAGGAACTACTTTCTTGGGCTTTACTCCCAAAATCAACCATTAATTTGCCGTCTTCAACCAGGACCGTTAAAGCTCTAAGTGAGGTTGAAGCTTTTGCTCTTCGGGCTGAAGACCTCAAGTTTGTTGCCAATCAATTTAGGCGCCTTCACAGTAAGAAGCTGCAGCACACTTTTCGATTTTATTCCCACCATTGGAGGACTTGGGCAGCCTGCTTTATCCAGGCTGCTTGGCGCCGATATAAGAAAAGGATATTTATGAAAGACCTGAGTTTGAGGGAAACCATTCCTTTGGATGAGACAGTAGCTAGTGAGAGAGAAAATGAGGACTATTCTACCGGTTCAAATTCAACTCAGGCTAAATTAAACCTCGGGGCTACAATTCTTGCTTCGAGATTTGCTGCTAACACACGAAGAGGAGCCTTGAAGATTAAAGATGACATGCCCAAGTTACCCAAGCCCGAAGAACCTGACTTTTCTACTGAAGCCGATGATGATTAG 2118 0.4221 MPKEFYSDGKKHKKPLWGATEPPALKPSNLLPLGKNRIAETFRIGGSKVFPEDHEPWRKRILDPGSEIVLKWNRVFIVSCLVALFVDPLYFYLPSVIESTESSCVRTDLTLRIVVTFLRTIADLFYLLHLIIKFRTAYVAPSSRVFGRGELVMDPKKIARRYVRSDFFIDFIATLPLPQMVIWFIIPATRSPQTDHKNNALALIVLLQYVPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGASWYLLSVDRYTTCWKFFCKKEQNPENCFGYLDCSSLNVKLRRIWANSTSVFSSCDPSNKDINFKFGIFENAVKKHVVSSNFIPKYLYCLWWGLQQLSSYGQNLETSTFIGETSFAIVIAILGLVLFSHLIGNMQTYLQSITIRLEEWRLKRRDTEEWMRHRQLPEDLRSRVRRFVQYKWLATRGVDEETILCALPADLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTQDTYIVREGDPVTEMLFIIRGRLDSSTTNGGRTGFFNSIILRPGDFCGEELLSWALLPKSTINLPSSTRTVKALSEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKKRIFMKDLSLRETIPLDETVASERENEDYSTGSNSTQAKLNLGATILASRFAANTRRGALKIKDDMPKLPKPEEPDFSTEADDD 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02596 705 ProSiteProfiles cAMP/cGMP binding motif profile. 470 600 IPR000595 -
Spst9g02596 705 Gene3D Helix hairpin bin 398 461 - -
Spst9g02596 705 MobiDBLite consensus disorder prediction 1 17 - -
Spst9g02596 705 MobiDBLite consensus disorder prediction 683 705 - -
Spst9g02596 705 SMART cnmp_10 470 601 IPR000595 -
Spst9g02596 705 SUPERFAMILY Voltage-gated potassium channels 66 392 - -
Spst9g02596 705 CDD CAP_ED 470 601 IPR000595 -
Spst9g02596 705 Gene3D - 75 395 - -
Spst9g02596 705 MobiDBLite consensus disorder prediction 683 697 - -
Spst9g02596 705 Pfam Ion transport protein 72 396 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Spst9g02596 705 FunFam Cyclic nucleotide-gated ion channel 1 468 586 - -
Spst9g02596 705 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 53 698 - -
Spst9g02596 705 PRINTS EAG/ELK/ERG potassium channel family signature 383 392 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst9g02596 705 PRINTS EAG/ELK/ERG potassium channel family signature 247 257 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst9g02596 705 PRINTS EAG/ELK/ERG potassium channel family signature 365 376 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst9g02596 705 PRINTS EAG/ELK/ERG potassium channel family signature 130 139 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst9g02596 705 PRINTS EAG/ELK/ERG potassium channel family signature 433 440 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst9g02596 705 Gene3D Jelly Rolls 468 588 IPR014710 -
Spst9g02596 705 MobiDBLite consensus disorder prediction 1 23 - -
Spst9g02596 705 SUPERFAMILY cAMP-binding domain-like 400 592 IPR018490 -
Spst9g02596 705 FunFam Cyclic nucleotide-gated ion channel 1 397 461 - -
Spst9g02596 705 Pfam Cyclic nucleotide-binding domain 494 581 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02596 Spst-Chr9 59925416 59933469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02596 5 704 Ion Channels AT4G30360 69.359 0.0 1006
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02596 K05391 - gmx:100808425 1345.87