Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02589 ATGCAGGCTCTAGCAGTCATCATCATGTGTGAACAATCCAATGAATGTAGAAAGATGTATATCCATGATAGAGGAAAGCTTGGATACTTAATTGGCAAGCTACCCAAGCCTGACATCGTAGACCAAGTTACCCTTGATGCTGCCTGGTTAATACTGAATAAGTCAACTCCTGAGAAATTTGATGTCCTGAAGGGTCAGTTAAATGGCATTACCTCTGCTGTCATCATGACGGTTGATGCCATCTCGCATATTTTTCACAAGGCTGTTTTAGAGCCAACATTTTGCCCCATGTATGCTCAGCTGTGTTCTTACCTGAATGGAAATCTGCCTCCATTCCCATCTGAGGAACCTGGTGGGAAAGAAATCACCTTTAAGAGAGTACTATTGAATACTTGCCAGGCGGCATTTGAAGATGCAAATTATACGAGGGAGGAACTAAAAATGATGACTGCCCCTGAGCAGGAGATGGAGCGTATGGACAAGGAAAGGCTGCTCAAGCTTAGTGCTCTAGGAAATATCCGGTTAATTGGTGAGCTATGGAAGCAGAAGATGGTTCCTGAAATGGTTGTCCATTACATTATTCAGAAGCTGTTAGGATACCCAGACAGCAAGTCTGGTCCTGTAGAGGAAAATGTTGAAGCCATATGTCAGTTTTTCATTACTATTGGCAAGCATCTTGATGAAAGTCCTAAATCACGGTCTAAAAGTGATACTTACTTTATTCGATTGAAAGAATTGAGCTCAAACCTACAACTTGTACCCCGGCTTAGATTCATGATTCAGGATGTTATAGAGTTGCGTGCTAGTAACTGGGTTCCTAGAAGGGAAGAGATTAGTGCCAAAAACATTACTGAAATTCAATCAAAGGCAGAAAATTTTTTTGGTTTGCGACCAGTTGCCACCGCAAGTATGAAAAATACACGTGGCAGTGTTCAAGGAAATGTCATCCCGGGGGGCTTCGCTATTGCTCGACCTGGTACGGGGAGTTTGATGCCTGCAATGCCAGGATATAGGAAGATACCTGGGATGTCTGGATTTGATAACAACAATTGGAAGATTCCTAAGGCTAGATCTCTGCCTAAAGGAGACTTCTCAGGTGTTCAGTCTGCATCATCCACCAACACTTTACCTTCCAATTCCACAACCGTGAATCCAAAATTGCTACCTCAAGGAAGTAGTGGTATTACAAGTGGAAGAAATAGTGCCCTAGTACATGGAGGTGGTACATTTTCTACTCGCCCAACAAACTATGGTTTAGCTCCTGACACAGAACCTCAATTCTCATCACCTGCTAAAACAGTTGCTCCTGTTCCAGTATCCTCTGAGAAGCCACAGGCACCAGCTGGTGGATTGAATACTGATGTTCTTTGCCGCAGAACTCTCTCTCTTCTAGAAGAATATTTCAGTGTTCGACTTTTGGAAGAGGCATTACAGCGTGTGGAGGAATTAAAATCTCCTTCTTACCACCCTGAGTTTGTTAAGGAAGCCATTTCCCTTGCACTTGATAAAAGTCCACCATGTGTTGAACCTGTAGCCAGTCTCATCGAGTATCTGTATGTTAAGAAGATTCTTACTGCTATAGATATAGGGACAGGCTGTTTGTTGTTTGGTTCTCTGCTGGATGATATTGGCATTGATTTACCTAAAGCACCTAGTGATTTTGGCATGATCATTGGGAAATTAATTTTGGCTGGGGGGTTGGATTTTAAGGTGGTGAAAGAGATTCTTAAGAAGGTGGAAGATGACATGTTTCAGAGAGCATTATTTGATAGTGCGGTAGGGGCCATTAAATCTGCATCAGGACAAGCTGTGTTGGATTTACAAACATCTGATATTAAGGCCTGCCAGAGTCTGCTCAAGTGA 1863 0.4267 MQALAVIIMCEQSNECRKMYIHDRGKLGYLIGKLPKPDIVDQVTLDAAWLILNKSTPEKFDVLKGQLNGITSAVIMTVDAISHIFHKAVLEPTFCPMYAQLCSYLNGNLPPFPSEEPGGKEITFKRVLLNTCQAAFEDANYTREELKMMTAPEQEMERMDKERLLKLSALGNIRLIGELWKQKMVPEMVVHYIIQKLLGYPDSKSGPVEENVEAICQFFITIGKHLDESPKSRSKSDTYFIRLKELSSNLQLVPRLRFMIQDVIELRASNWVPRREEISAKNITEIQSKAENFFGLRPVATASMKNTRGSVQGNVIPGGFAIARPGTGSLMPAMPGYRKIPGMSGFDNNNWKIPKARSLPKGDFSGVQSASSTNTLPSNSTTVNPKLLPQGSSGITSGRNSALVHGGGTFSTRPTNYGLAPDTEPQFSSPAKTVAPVPVSSEKPQAPAGGLNTDVLCRRTLSLLEEYFSVRLLEEALQRVEELKSPSYHPEFVKEAISLALDKSPPCVEPVASLIEYLYVKKILTAIDIGTGCLLFGSLLDDIGIDLPKAPSDFGMIIGKLILAGGLDFKVVKEILKKVEDDMFQRALFDSAVGAIKSASGQAVLDLQTSDIKACQSLLK 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02589 620 Pfam MA3 domain 460 568 IPR003891 -
Spst9g02589 620 Gene3D - 450 614 - -
Spst9g02589 620 SMART if4_15 45 270 IPR003890 GO:0003723|GO:0005515
Spst9g02589 620 MobiDBLite consensus disorder prediction 364 435 - -
Spst9g02589 620 SUPERFAMILY ARM repeat 51 273 IPR016024 -
Spst9g02589 620 Gene3D - 42 271 - -
Spst9g02589 620 MobiDBLite consensus disorder prediction 357 448 - -
Spst9g02589 620 Pfam MIF4G domain 51 270 IPR003890 GO:0003723|GO:0005515
Spst9g02589 620 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 50 613 IPR045208 GO:0003743
Spst9g02589 620 ProSiteProfiles MI domain profile. 455 577 IPR003891 -
Spst9g02589 620 SUPERFAMILY ARM repeat 453 593 IPR016024 -
Spst9g02589 620 SMART ma3_7 456 568 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02589 Spst-Chr9 59838034 59843098 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02589 51 618 Eukaryotic Initiation Factors Gene Family AT5G57870 58.537 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02589 K03260 - gmx:100800438 849.351