Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02587 ATGATAGTCTATTATGGGTCTTTGGACCTAATACTGAATAAGTTAACTCCTGAGAAATTTGATGTCCTGAAGGGTCAGTTAATTGATTCTGGCATTACCTCTGCTGACATCTTGAAGGATGTTATTTCGCTTATTTTCGACAAGGCTGTTTTAGAGCCAACATTTTGCCCCATGTATGCTCAGCTGTGTTCTGACCTGAATGAAAAGCTTCCTCCATTCCCATCTGAGGAACCTGGTGGGAAAGAAATCACCTTTAAGAGAGTACTATTGAATAATTGCCAGGAGGCATTTGAAGGTGCAGATAATATGAGGGAGGAACTAAAAAGGATGACTGCCCCTGATCAGGAGATGGAGCGTATGGACAAGGAAAGGTTACTCAAGCTTCGTACTCTTGGAAATATCCGTTTAATTGGTGAGCTATTGAAGCAGAAGATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGGAGCTGTTAGGATCCCCAGACAGCAAGTCTTGTCCTGTTGAGGAAAATGTTGAAGCCATATGTCAGTTTTTCAATACTATTGGCAAGCAGCTTGATGAAAGTCCTAAATCACGGCGTATAAGTGATATTTACTTTATTCGATTGAAAGAATTGAGCTCAAACCTACAACTTGTACCCCGGCTTAGGTTCATGATTCGTGATGTGATAGAGTTGCGTGCTAGTAACTGGGTTCCTAGAAGAGAAGAGATCAAAGCCAAAACCATAACTGAAATTCATTCAGAGGCAGAAAAAAATCTTGGTTTGCGACCAGGTGCCACTGCAAGTATGAGAAATACCCGTGGCAGTGTTCAAGGAAATGCCAGCCCAGGAGGCTTCCCTATTGCTCGACCTGGTACAGGTGGTTTGATGCCTGGAATGCCAGGAAACAGGAAGATAGCTGGGATGCCTGGATTTGATAACAAGTGGGAGATTCCTAAGACTAGATCTATGCCTAAAGGAGACTTCTCGGGTGTTCAGGCTGCATCATCCACTAACCCTTTACTTTCCAAGCCCACAACTGTGAATTCAAAATTGCTACCTCAAGGGAGTAGTGGTATTATAAGTGGAAGAAATAGTGCCCTAGTACATGGAGGTGGTACATTTTCTACTCGCCCAACAAACTATGGTTTAGCTCCTGACACACCACCTCAATTCTCATCACCTGCTAAAACAGTTGCTCCTGTTCCTGTATTCTCTGAGAAGCCACAAGCACCAGCTGGTGGATTGAATACTGATGATCTTCGCCGCAATACTCTCTCTCTTCTGGAAGAATATTTCAGTGTTCGGCTTTTGGAAGAGGCATTACAGTGTGTGGAGGAATTAAAATCTCCTTCTTACCACCCTGAGTTTGTTAAGGAAGCCATTTCCCTTGCACTTGATAAAAGTCCACCATGTGTTGAACCTGTAGCCAGTCTCATCGAGTATCTGTATGTTAAGAAGATTCTTACTGCTATAGATATAGGGACCGGCTGTTTGTTGTTTGGTTCTCTGCTGGATGATATTGGCATTGATTTACCTAAAGCACCTAGTAATTTTGGCATGATAATTGGGAAACTAATTTTGGCCGGGGGGTTGGATTTTAAGGTGTTGAAAGAGATTCTTAAGAAGGTGGAAGATGAAATGTTCCAGAGAGCATTATTTGACAGTGCGTTGGGCGCCATTAACTCTGCATCCGGACAAGCTGTGTTGGATTTACAAACATCTGATATTAAGGCCTGCCAGAGTCTGCTCAAGTGA 1743 0.4286 MIVYYGSLDLILNKLTPEKFDVLKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSEEPGGKEITFKRVLLNNCQEAFEGADNMREELKRMTAPDQEMERMDKERLLKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGSPDSKSCPVEENVEAICQFFNTIGKQLDESPKSRRISDIYFIRLKELSSNLQLVPRLRFMIRDVIELRASNWVPRREEIKAKTITEIHSEAEKNLGLRPGATASMRNTRGSVQGNASPGGFPIARPGTGGLMPGMPGNRKIAGMPGFDNKWEIPKTRSMPKGDFSGVQAASSTNPLLSKPTTVNSKLLPQGSSGIISGRNSALVHGGGTFSTRPTNYGLAPDTPPQFSSPAKTVAPVPVFSEKPQAPAGGLNTDDLRRNTLSLLEEYFSVRLLEEALQCVEELKSPSYHPEFVKEAISLALDKSPPCVEPVASLIEYLYVKKILTAIDIGTGCLLFGSLLDDIGIDLPKAPSNFGMIIGKLILAGGLDFKVLKEILKKVEDEMFQRALFDSALGAINSASGQAVLDLQTSDIKACQSLLK 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02587 580 ProSiteProfiles MI domain profile. 415 537 IPR003891 -
Spst9g02587 580 SMART ma3_7 416 528 IPR003891 -
Spst9g02587 580 SUPERFAMILY ARM repeat 410 551 IPR016024 -
Spst9g02587 580 Gene3D - 7 244 - -
Spst9g02587 580 Gene3D - 410 574 - -
Spst9g02587 580 Pfam MA3 domain 416 528 IPR003891 -
Spst9g02587 580 FunFam Eukaryotic translation initiation factor isoform 4G-2 4 232 - -
Spst9g02587 580 Pfam MIF4G domain 9 231 IPR003890 GO:0003723|GO:0005515
Spst9g02587 580 Coils Coil 90 110 - -
Spst9g02587 580 SMART if4_15 5 231 IPR003890 GO:0003723|GO:0005515
Spst9g02587 580 MobiDBLite consensus disorder prediction 326 345 - -
Spst9g02587 580 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 11 573 IPR045208 GO:0003743
Spst9g02587 580 SUPERFAMILY ARM repeat 4 234 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02587 Spst-Chr9 59826821 59828926 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02587 11 578 Eukaryotic Initiation Factors Gene Family AT5G57870 64.921 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02587 K03260 - gmx:100800438 969.533