Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02568 ATGAGTTTACAGTCACAAAATAACACAAAGTTGACAGTATTCATCTCTTCCAACATGAGCAACCCTGGAGATGAAAGGGAGCAGTGTCAAAAGAAGAGGAAATCTACCTTGTGTGAAGCTTCTAACTATAGGACATCAAGGAGAAGATTCTGCAGCAACCAAAGTGAAGAGGAGATGAACAAGGGAGTTTCAACAACATTGAAGCTTTACGATGATCCATGGAAGATCAAGAAGACTCTAACTGATAGTGATTTGGGAATCCTAAGTAGACTCTTGCTGGCTGCAGATTTGGTGAAGAAACAAATTTTGCCTATGTTGGGTGCAGATCATGCAAGAGCTGCAGAAACTGAAGAAGGGACCCCAGTTAGAGTTTGGGACATGGACACCAAATCCATGCACCAACTCGTTCTAAAGCGATGGTCTTCATCCAAAAGCTATGTTCTTATTGGAAAGTGGAACCAAGACTTCGTGAGAAGGCGTGATCTAAAGAAAGGTGATGAGATCGGATTTCATTGGGATCCCTATAATTGCATTTTCAATTTCTGTGTTCTCAAACGAGCTATGCCAGAGAATTAA 576 0.4132 MSLQSQNNTKLTVFISSNMSNPGDEREQCQKKRKSTLCEASNYRTSRRRFCSNQSEEEMNKGVSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADLVKKQILPMLGADHARAAETEEGTPVRVWDMDTKSMHQLVLKRWSSSKSYVLIGKWNQDFVRRRDLKKGDEIGFHWDPYNCIFNFCVLKRAMPEN 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02568 191 Gene3D - 73 188 IPR015300 -
Spst9g02568 191 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 44 186 - -
Spst9g02568 191 CDD B3_DNA 74 185 IPR003340 GO:0003677
Spst9g02568 191 SUPERFAMILY DNA-binding pseudobarrel domain 72 185 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02568 Spst-Chr9 59624463 59625038 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02568 76 171 RAV Transcription Factor Family AT1G50680 33.010 1.60e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02568 - - gmx:102667341 359.377