Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02555 ATGCAGGGTTTACATTCCATCGGCGGCGCTGACCGAAGGGTCAGGCCGCACCACCACAACCAACCCCAGCCGCTGAAGTGCCCTCGCTGCGACTCCCTCAACACCAAGTTCTGTTACTACAACAACTACAATCTATCCCAGCCCCGCCATTTCTGCAAGAACTGCCGCCGCTACTGGACCAAAGGTGGCGTCCTCCGCAACGTCCCCGTCGGTGGCGGTTGCCGCAAATCGAAACGCTCCAACAAGCCCAAAACCACCGTCACCAACACCAACAATAATAAGGACAACAACAACCAGCCTTCCTCCTCCTCGGAGACCGCTCCGGCCACTGCGCCGCAGGAGCCGGAGCGCAACTCCAACTCCCACTCCAGCAGCGAAAGCTCCACCCTAACCGTCGCCGCCACGGAGGCTATGTCGGCGCCGACATCAAACGCTGCTTCGAACAACGCTTTGTTAGTCGACAACGTTCGCGAGTCGAAGATGTTCGCTAACGCTAATAACCCCTCTTTGGAGAGAGGTGGCATTTTCTCTGAGATAGGGAGTTTCTCGAACCTCATGGCTTCAAATAACGAAGCATGGGGGTTTGGATTTGGGAATAGTAGTAATAGTAACAGTAACATCATCGATGCGGCGGCGTTTCGGTTCGGTGTCACTCATCAGCAGGGGAATGATCAGGTGCATGTGGCAGCAGGTGGAGACCATGTTGAGTGGCAGAACCAGCAGAATCAAGAGTTCGGTACGGCGTCGTTTCTCGATCACACGGTGGCGCCTGAGTTTTCGTCGCTGCAGCACAAGACTGCGTTTGGGTCGTTGGATTGGCAACCCGGTGCCGATCAAGGTTTGTTTGATCTCCCTAACACCGTTGGTCAACCGTACTGGACCCACACCCAATGGGCTGATCAGGAAAATCCACCTCTCTTTCACCTTCCTTGA 933 0.5531 MQGLHSIGGADRRVRPHHHNQPQPLKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSNKPKTTVTNTNNNKDNNNQPSSSSETAPATAPQEPERNSNSHSSSESSTLTVAATEAMSAPTSNAASNNALLVDNVRESKMFANANNPSLERGGIFSEIGSFSNLMASNNEAWGFGFGNSSNSNSNIIDAAAFRFGVTHQQGNDQVHVAAGGDHVEWQNQQNQEFGTASFLDHTVAPEFSSLQHKTAFGSLDWQPGADQGLFDLPNTVGQPYWTHTQWADQENPPLFHLP 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02555 310 MobiDBLite consensus disorder prediction 1 26 - -
Spst9g02555 310 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 18 221 IPR045174 GO:0003700|GO:0006355
Spst9g02555 310 ProSiteProfiles Zinc finger Dof-type profile. 25 79 IPR003851 GO:0003677|GO:0006355
Spst9g02555 310 MobiDBLite consensus disorder prediction 69 142 - -
Spst9g02555 310 ProSitePatterns Zinc finger Dof-type signature. 27 63 IPR003851 GO:0003677|GO:0006355
Spst9g02555 310 MobiDBLite consensus disorder prediction 83 142 - -
Spst9g02555 310 Pfam Dof domain, zinc finger 24 79 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02555 Spst-Chr9 59431032 59431964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02555 11 310 C2C2-Dof Transcription Factor Family AT5G60850 38.782 6.72e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Spst9g02555 zf-Dof 4.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02555 - - vun:114196340 405.216