Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02531 ATGCAACCGGTTATACGTGCATCACTGGTTCTGTGTTCTAGTATTTATATTCTTACAGCATTATTTGGATTTCTCCTATTTGGCGAGTCTACACTTGATGATGTGCTGGCCAACTTTGATACTGATTTAGGCATCCCTTATAGCAGTCTACTCAATGACATTGTTCGTATCAGCTATGCCCTCCACCTCATGCTTGGTGCTTTGAGGAATGCAATAGCCACATTTATTCAGGTCTCTCCAATACTGAAGGATAGCATCTGGACCTATCTTGAGCAATATGATCTGCCAGTAGTTGTTGGGCCTGATATCCAGAACAATCCACAATCCATGGGTACTCAGGTTTATGATATGCAATTTGAACTGAATGAAATTGAAGCAAGGAGAGAACAATATCCCTCAACTATATCTTTCCTTAATTTGGTAAATGCTCTTATTGCAGAAGAAAGTGATTTGTCTGATAGAGGGAGAAGGATATTAAGCATGTATGACATCAAGGATGAGGACTACGAGGGTGTAGTTGACCAGTCACGACTTTCAACAACTAAAGAATCATCACCACTTCAGACACAGCTCCCAGTTTTAGAGTTGCTCAAAGACTTCATGAGTGGAAAGACTGCCTTTCGGAACATAATGAGTATTCTTCTTCCAGGGGTGAATTCCGTTATTGCTGAACGCAGCAGTCAGTTATATGGGCAGCTTTTAGAGAATGCTGTGCAGCTTGCCCTGGAAATCATGATCTTGTGGACCTGA 750 0.4147 MQPVIRASLVLCSSIYILTALFGFLLFGESTLDDVLANFDTDLGIPYSSLLNDIVRISYALHLMLGALRNAIATFIQVSPILKDSIWTYLEQYDLPVVVGPDIQNNPQSMGTQVYDMQFELNEIEARREQYPSTISFLNLVNALIAEESDLSDRGRRILSMYDIKDEDYEGVVDQSRLSTTKESSPLQTQLPVLELLKDFMSGKTAFRNIMSILLPGVNSVIAERSSQLYGQLLENAVQLALEIMILWT 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02531 249 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 75 247 IPR021827 GO:0005643
Spst9g02531 249 Pfam Transmembrane amino acid transporter protein 1 82 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02531 Spst-Chr9 59177299 59181661 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02531 1 65 Amino Acid or Auxin Permease AAAP Family AT3G30390 73.846 1.13e-28 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02531 K14310 - gmx:100777616 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02531 9 59177299 59181661 Spst9g02531 9 59177299 59181661 ECH