Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02526 ATGGATGGGAACAAGGACGATGCGTTGAAATGTTTGAGAATCGGCAAAGAGGCGTTAGAAAACGGCGATCGTTCACGCGCGTTGAAGTTCGTGACGAAGGCGAGCCGCCTCGATCCCACGCTCCCCGTCGACGATCTATTGTCTAAAATAGAGGCGGACACAGGGGATCAGCCCCCTGCCGCGGAGGCGGCGGAGCCCACCAAGTCCCCCGATCAGCCTTCTATCCGCCGAAGGGCCACCACATCGGCGGGCCCAGCGGGTTCCTCATCCTCCTCGTCTGCCTCGTCCTCTTCGGCCACATATACCGAAGAACAAGTTTCAATTATCAGAGAAATTAAGAGGAAGAAAAACTTTTATGAGATATTGGGGTTAGAGAAAAGTTGCACTGTTGAAGATGTGAGGAAGTCTTATAGGAAACTGTCTCTTAAGGTTCATCCCGATAAGAACAAAGCCCCTGGCGCTGAGGAAGCGTTCAAGGCTGTGTCAAAGGCGTTTCAGTGCCTTAGCAATGAAGAGAGTAGGAGGAAGTATGATGTTTCCGGTGAAGATGAATCGATTTACGAGCGGCGTGCCGCGAGACCAGCTGCAAGGGGTTATAATGGTTACTATGAAAATGATGTTGATGCTGAGGAGATATTTAGGAACTTCTTCTTTGGAGGAATGACCCCAGCAGCCAATTTTGGAGGATTCAGTTTTGGACCAGGTGGTTTCAATGGTTTCAATGGTCATAGGCCTGCCGAACATGCTTCTGGTGGTTTTAATGTTCGTGCTTTAATTCAGTTGCTGCCGGTTCTACTCATATTGCTATTAAACTTTTTGCCTTCGTCGGATCCCTTGTACTCGCTGTCGAAGAGCTATCCCTATGAACATCGGTTTACTACACCTAAGGGTGTTAACTATTATGTCAAGTCTACAAAGTTTGTTCAGGATTATCCGCCGGAGAGCGAAGAACGAGCAGTACTTGAAGAAAGGGTGGAGAGGGAGTACTTCAGCGTTCTCCGCCAGAATTGTCATTTCGAGTTGCAGCGCCGCCAATGGGGGTATATCCGGGAAACACCGCACTGTGATATGCTGCGGAAGTTTGAGTTGGTGAATTGA 1098 0.4909 MDGNKDDALKCLRIGKEALENGDRSRALKFVTKASRLDPTLPVDDLLSKIEADTGDQPPAAEAAEPTKSPDQPSIRRRATTSAGPAGSSSSSSASSSSATYTEEQVSIIREIKRKKNFYEILGLEKSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNEESRRKYDVSGEDESIYERRAARPAARGYNGYYENDVDAEEIFRNFFFGGMTPAANFGGFSFGPGGFNGFNGHRPAEHASGGFNVRALIQLLPVLLILLLNFLPSSDPLYSLSKSYPYEHRFTTPKGVNYYVKSTKFVQDYPPESEERAVLEERVEREYFSVLRQNCHFELQRRQWGYIRETPHCDMLRKFELVN 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02526 365 Pfam Domain of unknown function (DUF1977) 274 345 IPR015399 -
Spst9g02526 365 CDD DnaJ 117 170 IPR001623 -
Spst9g02526 365 PRINTS DnaJ domain signature 119 137 IPR001623 -
Spst9g02526 365 PRINTS DnaJ domain signature 153 173 IPR001623 -
Spst9g02526 365 PRINTS DnaJ domain signature 137 152 IPR001623 -
Spst9g02526 365 MobiDBLite consensus disorder prediction 42 101 - -
Spst9g02526 365 SUPERFAMILY Chaperone J-domain 69 177 IPR036869 -
Spst9g02526 365 ProSiteProfiles dnaJ domain profile. 117 181 IPR001623 -
Spst9g02526 365 ProSitePatterns Nt-dnaJ domain signature. 158 177 IPR018253 -
Spst9g02526 365 MobiDBLite consensus disorder prediction 73 101 - -
Spst9g02526 365 PANTHER AT29763P-RELATED 1 360 - -
Spst9g02526 365 Gene3D DnaJ domain 113 227 IPR036869 -
Spst9g02526 365 SMART dnaj_3 116 173 IPR001623 -
Spst9g02526 365 FunFam Chaperone protein dnaJ 49 113 228 - -
Spst9g02526 365 Pfam DnaJ domain 117 178 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02526 Spst-Chr9 59133575 59134672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02526 112 178 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.845 1.77e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02526 K09518 - gmx:100788812 590.112