Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02521 ATGGCCTCCACCGCCCGGGACGAATCCTCCGACAACGACAGCACCTGCTCCTCGGGAACCGTGCTCGACTCCTCCCGCAGCTGGCTCAGCACCTTTAGCTTTCGCCGCGCCAGCCGCGGCACCAGCCGCAGCTCCCTCTCCCTCTCCGAGACTACCACCGGGGCTGCATGTGAGGCGATGCGCCGGCTCCACCTCCACAACACTGTTGGCCTCGATCACTTCCGCCTTCTGCGGCGGCTCGGAAGCGGCGACATCGGGAACGTGTACCTCTGCCAGATACGGAATCCGGTGGTGGGGTTGCCGCAGTGCCTCTACGCCATGAAGGTGGTGGACAGAGAGGCGCTGGCCATACGAAAGAAGCTGGAGCGGGCGGAGATGGAGAAGGAGATTCTAGCCATGATGGATCACCCCTTCTTGCCTACCCTATACGCTGCGTTTGATGCCTCTCATTACTCTTGCTTCGTCATGGACTTTTGCCCCGGCGGAGACTTATTCTCCGCTCGCCAACGCAACCCTGGGAAACGCTTTACCATCTCATCCGCTAAGTTTTATGCAGCCGAGACCCTCGTGGCATTAGAGTATCTCCACATGAAGGGTGTAGTGTACAGGGATTTGAAGCCGGAAAATGTGCTGGTGAGGGAGGACGGGCACATTATGCTTTCGGATTTTGATCTGTGTCTCAAATGCGACGTCGTTCCAAAGCTGTTGAGAAGCAAAACCAGATCGGAAGGCAGCGTCAAGACTCGAACATCTTCTTGTGCTGCCCCTGTGCAATCCTGTTTCTCCTCCTCAAGCAAGAGAAAGAAGGTAACAACAGTTATAAGGGAGAATGTGGAAGTGTGTGAACTTGACACAGAGGTAGTGGCAGAGCCCATCAATGCAAGGTCCAAGTCATTTGTGGGAACCCATGAGTACTTGGCACCTGAAGTGATTTCTGGTCAAGGACATGGCAGTGCAGTGGATTGGTGGACTTTTGGAGTTTTCTTGTATGAAATGTTATATGGGAGAACACCCTTCAAAGGTGAGAACAATGAGAAAACACTCACAAACATTCTGAAGCAGCCCTTGGCTTTCCCTAGAATTGCAGTGAGTAGCAGCAAGGAGTTTGAAGAGATGGTGAGGGTTCAAGACCTCATCAGTAAGCTCTTGTTGAAGAACCCAAAGAAGAGAATTGGGTGCTGCATGGGCTCAGTTGAGATCAAGAGGCATGAGTTCTTCAAGGGAGTGAATTGGGCTCTAATTAGATCAGTTAGGCCACCGGAGGTCCCTACTGATATGAAAAAGATTAGGAGTAGAGTTTTGTTACAGAAACTCAGCACGAAAGAGAAGGATCAACCCTTTCAGATTACTCATCATTTTGACTACTTCTGA 1371 0.5193 MASTARDESSDNDSTCSSGTVLDSSRSWLSTFSFRRASRGTSRSSLSLSETTTGAACEAMRRLHLHNTVGLDHFRLLRRLGSGDIGNVYLCQIRNPVVGLPQCLYAMKVVDREALAIRKKLERAEMEKEILAMMDHPFLPTLYAAFDASHYSCFVMDFCPGGDLFSARQRNPGKRFTISSAKFYAAETLVALEYLHMKGVVYRDLKPENVLVREDGHIMLSDFDLCLKCDVVPKLLRSKTRSEGSVKTRTSSCAAPVQSCFSSSSKRKKVTTVIRENVEVCELDTEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLTNILKQPLAFPRIAVSSSKEFEEMVRVQDLISKLLLKNPKKRIGCCMGSVEIKRHEFFKGVNWALIRSVRPPEVPTDMKKIRSRVLLQKLSTKEKDQPFQITHHFDYF 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02521 456 Gene3D Transferase(Phosphotransferase) domain 1 293 424 - -
Spst9g02521 456 ProSiteProfiles Protein kinase domain profile. 74 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02521 456 Gene3D Transferase(Phosphotransferase) domain 1 159 228 - -
Spst9g02521 456 FunFam serine/threonine-protein kinase D6PK-like 294 424 - -
Spst9g02521 456 Pfam Protein kinase domain 296 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02521 456 Pfam Protein kinase domain 75 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02521 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Spst9g02521 456 FunFam protein kinase PINOID 159 227 - -
Spst9g02521 456 PANTHER FLIPPASE KINASE 1-RELATED 30 427 - -
Spst9g02521 456 FunFam protein kinase PINOID 2 72 158 - -
Spst9g02521 456 MobiDBLite consensus disorder prediction 1 21 - -
Spst9g02521 456 SUPERFAMILY Protein kinase-like (PK-like) 60 431 IPR011009 -
Spst9g02521 456 CDD STKc_phototropin_like 72 424 - -
Spst9g02521 456 SMART serkin_6 74 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst9g02521 456 Coils Coil 107 127 - -
Spst9g02521 456 Gene3D Phosphorylase Kinase; domain 1 72 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02521 Spst-Chr9 59044871 59046333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02521 11 456 AGC Kinase Gene Family AT2G26700 55.278 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Spst9g02521 Pkinase 8.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02521 K08286 - gmx:100787216 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02521 9 59044871 59046333 Spst9g02521 9 59044871 59046333 ECH
Spst3g04887 3 100674202 100676072 Spst9g02521 9 59044871 59046333 PCT