Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02516 ATGGGAACCTCTGCAAACGCTGGGGCAGGTGGAAGAGGCGCCCCTGTCCCCAAAGATGTTGACTACGCCAATTACTTCTGCACCTATGCTTTTCTCTACCACCAGAAGGAGATGCTCTCCGATCGTGTTCGCATGGACGCTTACTTCAACGCCATCTTTGAGAACAAACGACACTTCGCTGGCAAGACTGTTTTGGATGTGGGCACTGGAAGTGGCATTCTTGCTATATGGTCTGCACAAGCAGGTGCGAGGAAGGTGTATGCAGTGGAAGCGACCAAGATGTCAGAACATGCCCGTGCACTCGTCAAAGCGAATAATCTTCAGAATGTAGTTGAGGTCATCGAGGGATCAATGGAGGATGTTACCTTACCTGAGAAAGTTGATGTGATCATCTCTGAGTGGATGGGTTATTTTCTTCTGCGTGAATCCATGTTTGATTCAGTTATACATGCTCGTGACCACTGGCTCAAACCGACAGGAGTGATGTATCCTAGTCATGCCCGCATGTGGATGGCACCTATCAGGACTGGGATAGGAGATCACAAATTGGCAGAATATGCGTCAACTATGGATGAATGGCACGCCTTTGTTGACGAAACAAAAACCTATTATGGTGTTGATATGGGATCCTTAACAAAGCCTTTTTCAGAGGAGCAAAGGAAATATTATCTACAGGCAAGTTCTTGTAGGTTGCTTAGGTTTTTTAATTTTGGGTTGGGTTGGATTTTGGGTCACGTTGTCAGGTTACGTGGATCTGGGACTTCTTCCTCATGGCAAACTAGGGTTCTGTGGCATGATTTCCACCATGGTTGTTCCATGACACCTTTCTCTGATGACGAAAGCAGCTGCATGAGCGGCAACGAAAAATCCAATTCACTACTATTGAAAGATTCTAGTTCCAAAACTTATTTTTGTGTGATTGTGGTAGGATTGCATGCTGGACACCTGGACTGTAAAAGGGGCCTTCGCTGCTGTGATGTTCTGGGCACCTTTTCTGCTGTATCGTGTATGGCTGATAGGGCTGTAGTGTTTTCTGGTCATTCTAATCTGGTTCCTAATGGCCTGGCCTGGGTGAGTGTCAGTGGGTGGCCTGATGCCGACTCTGCACCTGTGATTGTGCATTCCATCATTGTGTTGGAGCTGGAATTGTGTATCTGTGTGCCATATGCCTTTGATTTCTGCTTCTGCATATATACATCTTTGTGGAACAACCTTCATCCACATCAAGTCATTGGAACTGCTGCTATAATAAAGGAAATTGATTGTTTAACTGCCACAGTGACTGACATAGAAAAAGTTAGAGCAAATTTTTCTTTGTCAATATCAATGGAAAACACAAAGCTGTGTGGATTTGGAGGGTGGTTTGATGTACATTTTCGGGGAAGAAGTGAAGATCCAGCTGAACAGGAGATTGAGTTAACTACAGCTCCCAGTGTGGATTACGGCACACATTGGGGCCAACAGGTTTTTCTCTTGCATCCTCCTATGCATCTGAGTGAAGGTGATGATTTAAAGGTTTCTTTTCTAATGAGTCGCTCAAAGGAGAACCATCGTTTGATGGAGGTTGAACTTGGATGTGAGATTCATCAGCACTCTGGCAAGCTTCTTGCACCTTTCAAAAATAAGTACTACATTGAGTAA 1641 0.4485 MGTSANAGAGGRGAPVPKDVDYANYFCTYAFLYHQKEMLSDRVRMDAYFNAIFENKRHFAGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARALVKANNLQNVVEVIEGSMEDVTLPEKVDVIISEWMGYFLLRESMFDSVIHARDHWLKPTGVMYPSHARMWMAPIRTGIGDHKLAEYASTMDEWHAFVDETKTYYGVDMGSLTKPFSEEQRKYYLQASSCRLLRFFNFGLGWILGHVVRLRGSGTSSSWQTRVLWHDFHHGCSMTPFSDDESSCMSGNEKSNSLLLKDSSSKTYFCVIVVGLHAGHLDCKRGLRCCDVLGTFSAVSCMADRAVVFSGHSNLVPNGLAWVSVSGWPDADSAPVIVHSIIVLELELCICVPYAFDFCFCIYTSLWNNLHPHQVIGTAAIIKEIDCLTATVTDIEKVRANFSLSISMENTKLCGFGGWFDVHFRGRSEDPAEQEIELTTAPSVDYGTHWGQQVFLLHPPMHLSEGDDLKVSFLMSRSKENHRLMEVELGCEIHQHSGKLLAPFKNKYYIE 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02516 546 FunFam Protein arginine N-methyltransferase PRMT10 19 164 - -
Spst9g02516 546 Gene3D - 166 233 - -
Spst9g02516 546 Gene3D - 386 546 - -
Spst9g02516 546 Pfam Ribosomal protein L11 methyltransferase (PrmA) 60 133 - -
Spst9g02516 546 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 351 530 IPR029063 -
Spst9g02516 546 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 211 IPR029063 -
Spst9g02516 546 CDD AdoMet_MTases 63 163 - -
Spst9g02516 546 Gene3D Vaccinia Virus protein VP39 19 164 IPR029063 -
Spst9g02516 546 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 523 IPR025799 GO:0016274|GO:0018216
Spst9g02516 546 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 21 529 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02516 Spst-Chr9 58978501 58983380 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02516 24 221 C2H2 Transcription Factor Family AT3G12270 38.571 2.82e-34 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02516 K11434 - gmx:100795134 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g02516 9 58978501 58983380 Spst9g02516 9 58978501 58983380 ECH