Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02514 ATGTCATTTTCCTCTGGCCATAAGTTTTTCAAGAGGTTCTGTGTTGATGAATTCCAAATGGCAAGTCTTCCTTATAGCAGCTTTCTGTCTAATGATCTCTTGCCATCCCTTGGAGCCAGAATCAACCAAGAAACAAGGCTTAGGAAATGCATAGTTTCCCCTTTCGATCCACGTTATAGGGCATGGGAGATGCTATTGATTGTCCTTGTTGTTTACTCTGCATGGATTTGTCCCTTTGAGTTTGCCTTTCTGCCTTACAAGCAAGACCCACTATTCATCATAGACAACATTGTCAATGCCTTCTTTGCCATTGACATCATTCTCACATTCTTTGTTGCATATCTTGATAATCATTCCTACCTTCTTGTTGATGATCCAAAGAAAATTGCATTAAGGTACATATCAACCTGGTTTATCTTTGATATCTGTTCAACTGCACCATTTCAATCCATCAGCCTCCTATTCACTGATCATAGAAGTGAAATTGGCTTCAAAATTCTCAACATGCTTAGATTGTGGCGCCTGAGACGTGTCAGTTCTCTGTTTGCAAGACTAGAGAAGGACATTCGTTTCAATTACTTTTGGACTAGATGCTCCAAGCTCATTGCTGTGACATTGTTTGCTGTGCACTGTGCTGGATGCTTCAACTATATGATTGCAGATAGGTACCCTGATGCAAAATCAACATGGATTGGTTCTGTGTATCCAAATTTCAAAGAAATGAGTCTTTGGGACAGATATGTGACTGCCATGTATTGGTCCATTGTCACACTTACTACCACTGGCTATGGAGATTTGCATGCAGAAAACACAAGGGAGATGCTGTTTGACATCTTCTACATGTTGTTCAACTTGGGATTAACTTCATACATCATAGGAAACATCACAAACCTCGTAGTCCACTGGACAAGCCGCACCAGAAATTTCAGGGACACAGTGAGAGCAGCTTCAGAATTTGCATCAAGAAACCATCTGCCACATCACATTCAAGATCAGATGTTGTCACACTTGTGTTTGAAGTTCAAGACAGAAGGAGTGAAGCAGCAAGAGACACTGAATGGCATGCCAAAGGCAATTCGTGCAAGCATTGCATACCATCTATTCTTCCCCGTTGTGCAGAGGGTCTACCTCTTCCAAGGAGTTTCACATCACTTTCTTCTCCATCTGGTTACAGAGATGGAAGCTGATTATTTCCCTCCAAAGGAAGATGTTATCCTACAAAATGAGTCTCCCACAGACCTTTACATGTTGGTTTCAGGGGCAGTGGATCTCATTCGCAATGTTGATGGCAATGATCAAATTCTGAAGAAGGATAATGTAGGGGACACATTTGGGGAGATTGGAGTGTTATACTGTAGGCCACAACCCTTCACTGTTCGGACCACTGAGCTTTCTCAAATTTTAAGACTCAGCAGAACCTCCTTAATGAACTCTTTACATGCATATCCAGAAGCAACACAAATCATAATGAAAAATATCTTCATGAGGTTAAAGGGGCATGATGGCTTGGATTTTGAAAATTCACCAAGGGACCCCCAAATGGATGAGTGGGACAACACAGGAGGAAGTTTTCCTGAGTCATCTGTAAATAATTCACATGGGGATGGAAAAGGAGATCTTCATGCTACTTTGCATGAAGGTAATCCTGACATGGAAGAAAATGAAAAGAACCAAGGTCCTATAAGATGGAAACAGAAGGCTCTTGTAGATCAGCAACAAAACAAGAGTCTTTCTGACCTAACAATGAACAATGAACATAGGAAGATATTAGATGAACATATTATAGAGTTTTTGGAACCAGAAATCCCTATCAACTATCCTTTAGGAAAAATATACACAAACACTTATTCAACTACCTCTAACCATAAAACTGAGAGAGAAACAAAAAGACTCCTTAAAAAGAGAGTTACCATCCACTCTCTAATCAAACATAAAACTACCTTACAGGAACAACATAGCAAGTTGATAATTCTACCTGATTCACTAGAAGAGTTGCTCATTGCTGGTGAAAAATTTGGAGGCTCCAAACCTATAAAAGTAATTAGTATTGAGAATGCAGAGATAGATGATATTAATGTCCTTCGAGACGAAGATCATCTATTTTTTCTTTATAGTGATGCTGAAAATTTAAATTTATAA 2139 0.3946 MSFSSGHKFFKRFCVDEFQMASLPYSSFLSNDLLPSLGARINQETRLRKCIVSPFDPRYRAWEMLLIVLVVYSAWICPFEFAFLPYKQDPLFIIDNIVNAFFAIDIILTFFVAYLDNHSYLLVDDPKKIALRYISTWFIFDICSTAPFQSISLLFTDHRSEIGFKILNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCSKLIAVTLFAVHCAGCFNYMIADRYPDAKSTWIGSVYPNFKEMSLWDRYVTAMYWSIVTLTTTGYGDLHAENTREMLFDIFYMLFNLGLTSYIIGNITNLVVHWTSRTRNFRDTVRAASEFASRNHLPHHIQDQMLSHLCLKFKTEGVKQQETLNGMPKAIRASIAYHLFFPVVQRVYLFQGVSHHFLLHLVTEMEADYFPPKEDVILQNESPTDLYMLVSGAVDLIRNVDGNDQILKKDNVGDTFGEIGVLYCRPQPFTVRTTELSQILRLSRTSLMNSLHAYPEATQIIMKNIFMRLKGHDGLDFENSPRDPQMDEWDNTGGSFPESSVNNSHGDGKGDLHATLHEGNPDMEENEKNQGPIRWKQKALVDQQQNKSLSDLTMNNEHRKILDEHIIEFLEPEIPINYPLGKIYTNTYSTTSNHKTERETKRLLKKRVTIHSLIKHKTTLQEQHSKLIILPDSLEELLIAGEKFGGSKPIKVISIENAEIDDINVLRDEDHLFFLYSDAENLNL 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02514 712 ProSiteProfiles KHA domain profile. 635 712 IPR021789 -
Spst9g02514 712 MobiDBLite consensus disorder prediction 520 534 - -
Spst9g02514 712 FunFam Potassium channel KAT3 61 301 - -
Spst9g02514 712 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Spst9g02514 712 SUPERFAMILY Voltage-gated potassium channels 54 299 - -
Spst9g02514 712 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst9g02514 712 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst9g02514 712 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst9g02514 712 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst9g02514 712 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst9g02514 712 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst9g02514 712 FunFam Potassium channel KAT2 365 501 - -
Spst9g02514 712 Gene3D - 60 300 - -
Spst9g02514 712 PANTHER POTASSIUM CHANNEL AKT1 26 500 IPR045319 GO:0005249|GO:0006813
Spst9g02514 712 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Spst9g02514 712 MobiDBLite consensus disorder prediction 504 560 - -
Spst9g02514 712 Gene3D Jelly Rolls 344 509 IPR014710 -
Spst9g02514 712 SMART cnmp_10 377 494 IPR000595 -
Spst9g02514 712 CDD CAP_ED 377 490 IPR000595 -
Spst9g02514 712 SUPERFAMILY cAMP-binding domain-like 304 497 IPR018490 -
Spst9g02514 712 MobiDBLite consensus disorder prediction 538 560 - -
Spst9g02514 712 Pfam Cyclic nucleotide-binding domain 397 477 IPR000595 -
Spst9g02514 712 Pfam KHA, dimerisation domain of potassium ion channel 634 702 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02514 Spst-Chr9 58959670 58965704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02514 1 702 Ion Channels AT5G46240 61.538 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02514 K21867 - gmx:100800340 1257.66