Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02504 ATGGATATGCAACCTATGTATGCTTGTGAGCTAATGGGGCATATGGAAAATTTTCTAGTGGTACTTAGTGATAAATTAGGCACCAAGAGTTCCAATGGCTTCTTTGTAAAGTGGGGATTTGGACAGCCGTTACAAATTTTCATTTCTTTCCCACTCTTTGTACTTTCTATTCTCTTCCTTCAAGACCGTCGCATAATCTATAAGCTAAGGCATGGGGAGCATCTACTGAAGTCTAGAAGGCCTCTTCACAAACCCACAGAACCTAGAAGAAGTTGCAGGAGAAGGAGCAAGTGCAAGCCAGAGAAATCACAAGAAACAGAACTTGATCGCCAGCTTGCTTCCTCTGCCACCTGCAAGAGTCTTGTGTTTCATCAAAGACCTGGCTATGGGCAACTTGGGACCAAGTGTCTCGTCAAAGCTAACCACTTTCTTGCTGATATATCAGTATCTGACTTGAGCCATTACAATGTTAAAATAACACCTGAAGTCATCTCTCGTAAAACAAACAAGGCTATCATATCAGAGTTGGTGAGGGTTTACAGGAATACTGACTTAGCCACGAGGCTCCCTGTGTATGACGGAGGAAGAAACCTTTACACTGCAGGTTTGCTTCCTTTTACATACAAAGAGTTTAATGTAACATTGAGTGAGGACGATGATGCCACGGGTGGTACCAGGGAAAGAGAGTTTAAGGTGCTAATCAAGTTTGCAACTCATGTTAGCATGCATCAGCTACGTGAGCTTCTAAGTGGAAAGCAAGTGGACAATCCACAGGAAGCTCTAACCGTCTTTGATATTGTGTTAAGGGAGCTTGCGGCTCAGAGTTACGTGTCAATTGGGAGGTTTCTTTATTCTCCGGATGTAAGAAAACCACAGCAGTTGGGTGGTGGCCTTGAATCGTGGAGGGGCTTCTACCAGAGTATAAGGCCTACTCAAATGGGATTGTCACTTAACATAGATATGTCATCAATGGCTTTTATTGAACCACTACCTGTGATTGACTTTGTTGCTCAAATTTTGGGAAAAGATGTGCACTCAAAGCCATTGTCGGATGCGGATCGTGTCAAGATAAAAAAGGCCCTAAGAGGTGTAAAAGTTGAAGTTACACATAGAGGAAATTTTCGAAGAAAGTATAGAATATCAGGACTGACTTCACAACCTACAAGGGAGCTTATTTTCCCACTCGATGAACAAATGAATATGAAATCAGTAGTTGATTATTTTCAAGAAATGTATGGATTTACAATCAAATATTCTCATCTACCTTGCCTTCAAGTAGGAAGCCAACGGAAGGTGAACTATTTGCCCATGGAGGCATGCAAAATAGTTGGGGGCCAGAGATATACGAAAGGGCTAAATGAAAAGCAGATTACTTCTCTGCTGAAGGTCTCATGCCAGAGACCCCGGGAACAAGAGGCAGACATTTTACAGACAATGCAACAAAACAATTACGACAATAATCCGTATGCAAAAGAGTTTGGCATCAGCATAGACAACAAGCTTGCATCCGTGGAGGCTCGGGTTCTTCCACCACCTTGGTTGAAATATCACGACACTGGAAGAGAGAAAGAATACTTGCCACAAGTTGGTCAGTGGAACATGATGAACAAGAAAGTAATAAATGGAAGTACTGTAAGATATTGGGCATGTATCAATTTCTCTCGAAGTGTACAGGAAAGTACAGCTCGTGGATTTTGCCAACAGTTAGTTCAGATGTGCCAAATCTCAGTCATGGAATTCAGTCAGGACCCTGTGATTCCTATATATTCCACAAGACCAGATCAGGTAAAGAAAGCTTTGAAGTATGTACATTCTGCTGCTATGGATAAGCTTGGCGGGAAAGAGCTAGAGTTGTTGATTGCCATTCTTCCAGACAATAATGGCTCTCTATATGGTGATCTCAAAAGAATTTGCGAAACAGATCTGGGGTTGATTTCTCAATGCTGCCTTACAAAACATGTATTCAAGATCAATAGACAATACCTAGCAAATGTGGCACTGAAAATCAATGTCAAGATGGGAGGAAGAAACACAGTACTGTTGGATGCTTTAAGTTGGAGGATTCCACTGGTTAGTGATATTCCAACGATAATATTTGGAGCTGATGTAACTCATCCAGAATCAGGAGAGGATTCTTGTCCATCCATTGCTGCTGTTGTAGCTTCCCAGGACTGGCCTGAAGTAACAAAGTATGCAGGATTGGTTTGTGCTCAGCCTCATCGAGAAGAACTTATTCAAGATCTTTTCAGATCTTGGAAAGATCCACAAAGGGGTGTAATTTATGGTGGTATGATCAGGGAGCTTTTACTATCATTTAAGAAGGCAACGGGACAAAAACCATTGAGAATAATCTTTTACAGGGATGGGGTAAGTGAAGGACAGTTCTACCAGGTTTTGCTATATGAGCTTGATGCCATCCGCAAGGCTTGTGCATCTTTGGAACCTAGTTACCAACCACCAGTAACATTTGTAGTTGTTCAAAAACGGCATCACACTAGACTCTTTGCAAACAATCACGACGACAGAAATAGCATTGATAAGAGTGGGAATATCTTACCTGGTACTGTGGTAGATTCTAAGATCTGTCATCCTTCTGAATTCGACTTCTACTTATGTAGTCATGCGGGAATTCAGGGTACAAGTAGACCAGCACACTATCATGTCCTCTGGGACGAGAACAATTTCACTGCAGATGAGATTCAGTCTCTAACCAACAATTTATGCTACACCTATGCAAGATGTACACGGTCTGTTTCTGTAGTGCCTCCAGCATACTATGCTCATCTAGCAGCCTACAGGGCTCGATTCTACATGGAACCTGATGTTGTTGAGATTACTAAACTGCGAGGTACAAGATCTAAAGAAGGGCCAGTTCGGCCACTGCCTGCTCTGAAAGAGAAGGTGAAGAATGTTATGTTTTACTGTTGA 2928 0.4201 MDMQPMYACELMGHMENFLVVLSDKLGTKSSNGFFVKWGFGQPLQIFISFPLFVLSILFLQDRRIIYKLRHGEHLLKSRRPLHKPTEPRRSCRRRSKCKPEKSQETELDRQLASSATCKSLVFHQRPGYGQLGTKCLVKANHFLADISVSDLSHYNVKITPEVISRKTNKAIISELVRVYRNTDLATRLPVYDGGRNLYTAGLLPFTYKEFNVTLSEDDDATGGTREREFKVLIKFATHVSMHQLRELLSGKQVDNPQEALTVFDIVLRELAAQSYVSIGRFLYSPDVRKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKVEVTHRGNFRRKYRISGLTSQPTRELIFPLDEQMNMKSVVDYFQEMYGFTIKYSHLPCLQVGSQRKVNYLPMEACKIVGGQRYTKGLNEKQITSLLKVSCQRPREQEADILQTMQQNNYDNNPYAKEFGISIDNKLASVEARVLPPPWLKYHDTGREKEYLPQVGQWNMMNKKVINGSTVRYWACINFSRSVQESTARGFCQQLVQMCQISVMEFSQDPVIPIYSTRPDQVKKALKYVHSAAMDKLGGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKINRQYLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDSCPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFRSWKDPQRGVIYGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFANNHDDRNSIDKSGNILPGTVVDSKICHPSEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPDVVEITKLRGTRSKEGPVRPLPALKEKVKNVMFYC 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02504 975 SUPERFAMILY Ribonuclease H-like 607 940 IPR012337 -
Spst9g02504 975 ProSiteProfiles Piwi domain profile. 618 939 IPR003165 GO:0003676
Spst9g02504 975 SUPERFAMILY PAZ domain 325 485 IPR036085 GO:0005515
Spst9g02504 975 Pfam Mid domain of argonaute 527 604 IPR032473 -
Spst9g02504 975 FunFam Argonaute 10 508 681 - -
Spst9g02504 975 Pfam Piwi domain 619 938 IPR003165 GO:0003676
Spst9g02504 975 Pfam N-terminal domain of argonaute 135 268 IPR032474 -
Spst9g02504 975 Gene3D - 508 681 - -
Spst9g02504 975 CDD Piwi_ago-like 488 938 IPR045246 -
Spst9g02504 975 SMART PAZ_2_a_3 334 466 IPR003100 GO:0005515
Spst9g02504 975 SMART Piwi_a_2 618 939 IPR003165 GO:0003676
Spst9g02504 975 Pfam Argonaute linker 2 domain 472 516 IPR032472 -
Spst9g02504 975 Gene3D - 687 975 IPR036397 GO:0003676
Spst9g02504 975 SMART DUF1785_2 277 329 IPR014811 -
Spst9g02504 975 MobiDBLite consensus disorder prediction 80 97 - -
Spst9g02504 975 Pfam PAZ domain 334 460 IPR003100 GO:0005515
Spst9g02504 975 FunFam Protein argonaute-2 323 449 - -
Spst9g02504 975 FunFam protein argonaute 10-like 687 975 - -
Spst9g02504 975 Gene3D paz domain 324 448 - -
Spst9g02504 975 MobiDBLite consensus disorder prediction 80 106 - -
Spst9g02504 975 CDD PAZ_argonaute_like 329 443 - -
Spst9g02504 975 Pfam Argonaute linker 1 domain 278 327 IPR014811 -
Spst9g02504 975 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 119 939 - -
Spst9g02504 975 ProSiteProfiles PAZ domain profile. 330 444 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02504 Spst-Chr9 58843409 58851243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02504 123 975 Eukaryotic Initiation Factors Gene Family AT5G43810 74.913 0.0 1394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02504 K11593 - gmx:100810235 1708.73