Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g02478 ATGGAGGTTAGGTATGAGGATGGAAATGGTTATGTGAAGTCAAATTCAGGAGACAAGGCCCTACAGGAACAAAACAACACTCTTGCTAAGAAGATAAAGGAGAAAGAGAAGGCACTAGCAGCACAACAAACACAGATGGAGCGACAAGGTGATGAAATCGATCTAGCTTCCTCTGTCCTTGTACCTCAACCATTGGAGACATCTAATATTAGAGGGTGCTCACAAGTAAGAGATGATGGAGGAGATAATGAAGGAACAGCAACTCCAAGTCGAGCAAATGCCATTCTTCCACCTTGGATGCTGCGTCCTACAAATGAATAG 321 0.4361 MEVRYEDGNGYVKSNSGDKALQEQNNTLAKKIKEKEKALAAQQTQMERQGDEIDLASSVLVPQPLETSNIRGCSQVRDDGGDNEGTATPSRANAILPPWMLRPTNE 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g02478 106 MobiDBLite consensus disorder prediction 71 94 - -
Spst9g02478 106 Coils Coil 18 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g02478 Spst-Chr9 58525352 58526859 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g02478 18 104 MADS-box Gene Family AT5G60910 45.977 1.04e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g02478 K09264 - gmx:100784742 129.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04782 3 99559566 99560373 Spst9g02478 9 58525352 58526859 ECH
Spst1g01467 1 18367206 18374702 Spst9g02478 9 58525352 58526859 ECH
Spst9g02478 9 58525352 58526859 Spst9g02478 9 58525352 58526859 ECH
Spst3g04784 3 99564826 99568896 Spst9g02478 9 58525352 58526859 PCT